Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04918 and H281DRAFT_04919 are separated by 77 nucleotides H281DRAFT_04919 and H281DRAFT_04920 are separated by 120 nucleotides H281DRAFT_04920 and H281DRAFT_04921 are separated by 272 nucleotides
H281DRAFT_04918: H281DRAFT_04918 - transcriptional regulator, LysR family, at 79,287 to 80,204
_04918
H281DRAFT_04919: H281DRAFT_04919 - hypothetical protein, at 80,282 to 80,926
_04919
H281DRAFT_04920: H281DRAFT_04920 - Predicted arabinose efflux permease, MFS family, at 81,047 to 82,327
_04920
H281DRAFT_04921: H281DRAFT_04921 - iron complex outermembrane recepter protein, at 82,600 to 84,762
_04921
Position (kb) 81
82
83 Strain fitness (log2 ratio) -1
0
1 at 80.472 kb on + strand, within H281DRAFT_04919 at 80.473 kb on - strand, within H281DRAFT_04919 at 80.614 kb on + strand, within H281DRAFT_04919 at 80.615 kb on - strand, within H281DRAFT_04919 at 80.620 kb on - strand, within H281DRAFT_04919 at 80.620 kb on - strand, within H281DRAFT_04919 at 80.707 kb on + strand, within H281DRAFT_04919 at 80.707 kb on + strand at 80.708 kb on - strand, within H281DRAFT_04919 at 80.709 kb on + strand, within H281DRAFT_04919 at 80.895 kb on + strand at 80.896 kb on - strand at 80.958 kb on + strand at 80.972 kb on + strand at 81.960 kb on + strand, within H281DRAFT_04920 at 82.167 kb on + strand, within H281DRAFT_04920 at 82.168 kb on - strand, within H281DRAFT_04920 at 82.168 kb on - strand, within H281DRAFT_04920 at 82.370 kb on - strand at 82.370 kb on - strand at 82.530 kb on - strand at 82.532 kb on + strand at 82.679 kb on - strand at 82.679 kb on - strand at 82.932 kb on - strand, within H281DRAFT_04921 at 82.932 kb on - strand, within H281DRAFT_04921 at 82.938 kb on + strand, within H281DRAFT_04921 at 82.944 kb on - strand, within H281DRAFT_04921 at 82.944 kb on - strand, within H281DRAFT_04921 at 83.068 kb on + strand, within H281DRAFT_04921 at 83.068 kb on + strand, within H281DRAFT_04921 at 83.068 kb on + strand, within H281DRAFT_04921
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 80,472 + H281DRAFT_04919 0.29 -0.6 80,473 - H281DRAFT_04919 0.30 +0.4 80,614 + H281DRAFT_04919 0.51 +0.7 80,615 - H281DRAFT_04919 0.52 -0.1 80,620 - H281DRAFT_04919 0.52 -0.1 80,620 - H281DRAFT_04919 0.52 +0.4 80,707 + H281DRAFT_04919 0.66 +0.6 80,707 + -0.5 80,708 - H281DRAFT_04919 0.66 -0.1 80,709 + H281DRAFT_04919 0.66 +0.0 80,895 + +0.4 80,896 - +0.1 80,958 + +0.6 80,972 + -0.3 81,960 + H281DRAFT_04920 0.71 +0.3 82,167 + H281DRAFT_04920 0.87 +0.6 82,168 - H281DRAFT_04920 0.88 +0.5 82,168 - H281DRAFT_04920 0.88 +0.5 82,370 - +0.8 82,370 - +0.5 82,530 - +0.2 82,532 + -0.4 82,679 - -0.2 82,679 - -0.2 82,932 - H281DRAFT_04921 0.15 -0.7 82,932 - H281DRAFT_04921 0.15 +0.4 82,938 + H281DRAFT_04921 0.16 +1.6 82,944 - H281DRAFT_04921 0.16 +0.1 82,944 - H281DRAFT_04921 0.16 +0.1 83,068 + H281DRAFT_04921 0.22 -0.5 83,068 + H281DRAFT_04921 0.22 +0.0 83,068 + H281DRAFT_04921 0.22 -0.1
Or see this region's nucleotide sequence