Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00715 and H281DRAFT_00716 are separated by 167 nucleotides H281DRAFT_00716 and H281DRAFT_00717 are separated by 269 nucleotides H281DRAFT_00717 and H281DRAFT_00718 are separated by 231 nucleotides
H281DRAFT_00715: H281DRAFT_00715 - Glycosyltransferase involved in cell wall bisynthesis, at 803,381 to 804,709
_00715
H281DRAFT_00716: H281DRAFT_00716 - Glycosyltransferase involved in cell wall bisynthesis, at 804,877 to 806,094
_00716
H281DRAFT_00717: H281DRAFT_00717 - HTH-type transcriptional regulator / antitoxin HigA, at 806,364 to 806,786
_00717
H281DRAFT_00718: H281DRAFT_00718 - tyrosine-protein kinase Etk/Wzc, at 807,018 to 809,429
_00718
Position (kb) 804
805
806
807 Strain fitness (log2 ratio) -1
0
1 at 804.045 kb on + strand, within H281DRAFT_00715 at 804.287 kb on + strand, within H281DRAFT_00715 at 804.288 kb on - strand, within H281DRAFT_00715 at 804.830 kb on + strand at 805.078 kb on + strand, within H281DRAFT_00716 at 805.078 kb on + strand, within H281DRAFT_00716 at 805.137 kb on + strand, within H281DRAFT_00716 at 805.247 kb on - strand, within H281DRAFT_00716 at 806.441 kb on + strand, within H281DRAFT_00717 at 806.563 kb on + strand, within H281DRAFT_00717 at 806.589 kb on - strand, within H281DRAFT_00717 at 806.620 kb on + strand at 806.784 kb on + strand at 806.785 kb on - strand at 807.082 kb on + strand at 807.082 kb on + strand at 807.083 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 804,045 + H281DRAFT_00715 0.50 -0.3 804,287 + H281DRAFT_00715 0.68 +0.9 804,288 - H281DRAFT_00715 0.68 -0.4 804,830 + +0.1 805,078 + H281DRAFT_00716 0.17 +1.3 805,078 + H281DRAFT_00716 0.17 -0.1 805,137 + H281DRAFT_00716 0.21 +0.6 805,247 - H281DRAFT_00716 0.30 +0.5 806,441 + H281DRAFT_00717 0.18 +0.6 806,563 + H281DRAFT_00717 0.47 -1.1 806,589 - H281DRAFT_00717 0.53 -0.0 806,620 + +1.2 806,784 + -0.6 806,785 - +0.3 807,082 + +0.4 807,082 + -0.0 807,083 - -0.2
Or see this region's nucleotide sequence