Experiment: 4-Methyl-2-oxopentanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00542 and H281DRAFT_00543 are separated by 52 nucleotides H281DRAFT_00543 and H281DRAFT_00544 are separated by 183 nucleotides H281DRAFT_00544 and H281DRAFT_00545 are separated by 49 nucleotides
H281DRAFT_00542: H281DRAFT_00542 - UDP-2,3-diacylglucosamine hydrolase, at 611,682 to 612,479
_00542
H281DRAFT_00543: H281DRAFT_00543 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B), at 612,532 to 613,026
_00543
H281DRAFT_00544: H281DRAFT_00544 - peptidyl-prolyl cis-trans isomerase A (cyclophilin A), at 613,210 to 613,794
_00544
H281DRAFT_00545: H281DRAFT_00545 - TPR repeat-containing protein, at 613,844 to 614,656
_00545
Position (kb) 613
614 Strain fitness (log2 ratio) -1
0
1 at 612.506 kb on - strand at 612.506 kb on - strand at 612.921 kb on - strand, within H281DRAFT_00543 at 612.939 kb on - strand, within H281DRAFT_00543 at 612.939 kb on - strand, within H281DRAFT_00543 at 612.939 kb on - strand, within H281DRAFT_00543 at 612.939 kb on - strand, within H281DRAFT_00543 at 612.939 kb on - strand, within H281DRAFT_00543 at 612.943 kb on - strand, within H281DRAFT_00543 at 613.212 kb on - strand at 613.212 kb on - strand at 613.231 kb on - strand at 613.540 kb on - strand, within H281DRAFT_00544 at 613.540 kb on - strand, within H281DRAFT_00544 at 613.659 kb on - strand, within H281DRAFT_00544 at 613.864 kb on - strand at 613.864 kb on - strand at 613.864 kb on - strand at 613.864 kb on - strand at 613.864 kb on - strand at 613.864 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Methyl-2-oxopentanoic (C) remove 612,506 - +1.6 612,506 - -0.1 612,921 - H281DRAFT_00543 0.79 +0.2 612,939 - H281DRAFT_00543 0.82 -0.5 612,939 - H281DRAFT_00543 0.82 -0.2 612,939 - H281DRAFT_00543 0.82 +0.1 612,939 - H281DRAFT_00543 0.82 +0.2 612,939 - H281DRAFT_00543 0.82 +1.0 612,943 - H281DRAFT_00543 0.83 +0.1 613,212 - +0.0 613,212 - -0.6 613,231 - +0.4 613,540 - H281DRAFT_00544 0.56 +0.8 613,540 - H281DRAFT_00544 0.56 +0.5 613,659 - H281DRAFT_00544 0.77 +0.5 613,864 - +0.1 613,864 - -1.5 613,864 - +0.7 613,864 - +0.1 613,864 - +0.1 613,864 - +0.8
Or see this region's nucleotide sequence