Experiment: m.b. Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09450 and PGA1_c09460 are separated by 355 nucleotides PGA1_c09460 and PGA1_c09470 are separated by 319 nucleotides PGA1_c09470 and PGA1_c09480 are separated by 723 nucleotides
PGA1_c09450: PGA1_c09450 - DNA helicase II UvrD, at 966,842 to 969,205
_c09450
PGA1_c09460: PGA1_c09460 - Uncharacterized conserved small protein, at 969,561 to 969,779
_c09460
PGA1_c09470: PGA1_c09470 - putative ATP-binding protein, at 970,099 to 971,169
_c09470
PGA1_c09480: PGA1_c09480 - putative protein MraZ, at 971,893 to 972,474
_c09480
Position (kb) 970
971
972 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 969.123 kb on + strand at 969.131 kb on - strand at 969.207 kb on - strand at 969.221 kb on + strand at 969.229 kb on - strand at 969.244 kb on + strand at 969.392 kb on + strand at 969.397 kb on + strand at 969.412 kb on + strand at 969.473 kb on + strand at 969.495 kb on + strand at 969.535 kb on - strand at 969.548 kb on - strand at 969.610 kb on - strand, within PGA1_c09460 at 969.610 kb on - strand, within PGA1_c09460 at 969.675 kb on - strand, within PGA1_c09460 at 969.753 kb on - strand, within PGA1_c09460 at 969.790 kb on - strand at 969.809 kb on - strand at 969.827 kb on + strand at 969.827 kb on + strand at 969.835 kb on - strand at 969.924 kb on + strand at 969.932 kb on - strand at 969.959 kb on - strand at 969.982 kb on + strand at 970.022 kb on + strand at 970.030 kb on - strand at 970.071 kb on - strand at 970.198 kb on - strand at 970.198 kb on - strand at 970.203 kb on - strand at 970.291 kb on + strand, within PGA1_c09470 at 970.299 kb on - strand, within PGA1_c09470 at 970.299 kb on - strand, within PGA1_c09470 at 970.299 kb on - strand, within PGA1_c09470 at 970.317 kb on - strand, within PGA1_c09470 at 970.353 kb on + strand, within PGA1_c09470 at 970.358 kb on + strand, within PGA1_c09470 at 970.361 kb on - strand, within PGA1_c09470 at 970.370 kb on + strand, within PGA1_c09470 at 970.378 kb on - strand, within PGA1_c09470 at 970.460 kb on - strand, within PGA1_c09470 at 970.466 kb on - strand, within PGA1_c09470 at 970.509 kb on - strand, within PGA1_c09470 at 970.523 kb on + strand, within PGA1_c09470 at 970.531 kb on - strand, within PGA1_c09470 at 970.571 kb on + strand, within PGA1_c09470 at 970.651 kb on - strand, within PGA1_c09470 at 970.658 kb on + strand, within PGA1_c09470 at 970.674 kb on + strand, within PGA1_c09470 at 970.682 kb on - strand, within PGA1_c09470 at 970.787 kb on - strand, within PGA1_c09470 at 970.824 kb on + strand, within PGA1_c09470 at 970.906 kb on + strand, within PGA1_c09470 at 971.019 kb on - strand, within PGA1_c09470 at 971.116 kb on + strand at 971.124 kb on - strand at 971.138 kb on + strand at 971.143 kb on + strand at 971.148 kb on + strand at 971.151 kb on - strand at 971.172 kb on - strand at 971.200 kb on + strand at 971.237 kb on + strand at 971.237 kb on + strand at 971.237 kb on + strand at 971.287 kb on + strand at 971.438 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.002 mg/ml remove 969,123 + -1.0 969,131 - +0.4 969,207 - +1.2 969,221 + +0.0 969,229 - +0.5 969,244 + -0.1 969,392 + -0.7 969,397 + -0.4 969,412 + -0.3 969,473 + +0.6 969,495 + +0.0 969,535 - +0.3 969,548 - -0.5 969,610 - PGA1_c09460 0.22 +1.0 969,610 - PGA1_c09460 0.22 -0.1 969,675 - PGA1_c09460 0.52 -1.4 969,753 - PGA1_c09460 0.88 -2.2 969,790 - -0.5 969,809 - -1.8 969,827 + +1.0 969,827 + -0.4 969,835 - -0.2 969,924 + -0.6 969,932 - -0.2 969,959 - -0.8 969,982 + -0.6 970,022 + +1.6 970,030 - -0.0 970,071 - -1.0 970,198 - -3.0 970,198 - -3.3 970,203 - -3.6 970,291 + PGA1_c09470 0.18 -1.7 970,299 - PGA1_c09470 0.19 -2.4 970,299 - PGA1_c09470 0.19 -1.8 970,299 - PGA1_c09470 0.19 -3.2 970,317 - PGA1_c09470 0.20 -1.0 970,353 + PGA1_c09470 0.24 -2.4 970,358 + PGA1_c09470 0.24 +0.0 970,361 - PGA1_c09470 0.24 -3.6 970,370 + PGA1_c09470 0.25 -1.8 970,378 - PGA1_c09470 0.26 +0.6 970,460 - PGA1_c09470 0.34 -1.7 970,466 - PGA1_c09470 0.34 -0.7 970,509 - PGA1_c09470 0.38 -2.2 970,523 + PGA1_c09470 0.40 -0.4 970,531 - PGA1_c09470 0.40 -0.6 970,571 + PGA1_c09470 0.44 -2.2 970,651 - PGA1_c09470 0.52 -2.0 970,658 + PGA1_c09470 0.52 -2.0 970,674 + PGA1_c09470 0.54 -0.2 970,682 - PGA1_c09470 0.54 -1.4 970,787 - PGA1_c09470 0.64 -2.0 970,824 + PGA1_c09470 0.68 -1.2 970,906 + PGA1_c09470 0.75 +0.6 971,019 - PGA1_c09470 0.86 -1.7 971,116 + -2.7 971,124 - -2.2 971,138 + -0.4 971,143 + -1.0 971,148 + -0.7 971,151 - +0.6 971,172 - +1.8 971,200 + -1.8 971,237 + +0.3 971,237 + -0.3 971,237 + +0.7 971,287 + -0.6 971,438 + -0.1
Or see this region's nucleotide sequence