Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_65p00030
Experiment: m.b. Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.002 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,785 | - | PGA1_65p00020 | 0.29 | -0.6 | |
1,987 | + | PGA1_65p00020 | 0.44 | -0.3 | |
1,989 | - | PGA1_65p00020 | 0.44 | +3.3 | |
2,669 | - | +1.2 | |||
2,683 | + | -1.6 | |||
2,683 | + | +1.7 | |||
2,774 | + | +1.7 | |||
2,856 | + | +0.7 | |||
2,875 | - | +0.7 | |||
3,023 | - | PGA1_65p00030 | 0.14 | +1.7 | |
3,153 | - | PGA1_65p00030 | 0.21 | +1.2 | |
3,255 | + | PGA1_65p00030 | 0.27 | +0.4 | |
3,307 | + | PGA1_65p00030 | 0.30 | +0.7 | |
3,433 | - | PGA1_65p00030 | 0.37 | +0.1 | |
3,461 | + | PGA1_65p00030 | 0.39 | +0.4 | |
3,512 | + | PGA1_65p00030 | 0.42 | +1.1 | |
3,545 | + | PGA1_65p00030 | 0.44 | +1.2 | |
3,928 | + | PGA1_65p00030 | 0.65 | +1.1 | |
3,937 | - | PGA1_65p00030 | 0.66 | +0.9 | |
4,047 | + | PGA1_65p00030 | 0.72 | +0.7 | |
4,129 | + | PGA1_65p00030 | 0.77 | -1.5 | |
4,318 | + | PGA1_65p00030 | 0.87 | +0.5 | |
4,402 | + | +1.4 | |||
4,542 | - | +3.3 | |||
4,556 | - | +0.7 | |||
4,607 | + | +2.7 | |||
4,657 | - | -1.3 | |||
4,936 | + | -0.1 | |||
4,969 | + | PGA1_65p00040 | 0.11 | +1.4 | |
5,028 | - | PGA1_65p00040 | 0.13 | +1.4 | |
5,028 | - | +0.1 | |||
5,134 | - | PGA1_65p00040 | 0.17 | -1.6 | |
5,289 | - | +0.1 | |||
5,317 | - | PGA1_65p00040 | 0.24 | +0.5 | |
5,428 | + | PGA1_65p00040 | 0.29 | +0.7 | |
5,497 | + | PGA1_65p00040 | 0.32 | +0.7 |
Or see this region's nucleotide sequence