Experiment: m.b. Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c29580 and PGA1_c29590 are separated by 197 nucleotides PGA1_c29590 and PGA1_c29600 are separated by 2 nucleotides
PGA1_c29580: PGA1_c29580 - hypothetical protein, at 3,093,250 to 3,094,371
_c29580
PGA1_c29590: PGA1_c29590 - hypothetical protein, at 3,094,569 to 3,094,763
_c29590
PGA1_c29600: PGA1_c29600 - hypothetical protein, at 3,094,766 to 3,095,881
_c29600
Position (kb)
3094
3095 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3093.587 kb on - strand, within PGA1_c29580 at 3093.592 kb on + strand, within PGA1_c29580 at 3093.603 kb on + strand, within PGA1_c29580 at 3093.611 kb on - strand, within PGA1_c29580 at 3093.626 kb on + strand, within PGA1_c29580 at 3093.628 kb on - strand, within PGA1_c29580 at 3093.634 kb on - strand, within PGA1_c29580 at 3093.634 kb on - strand, within PGA1_c29580 at 3093.675 kb on + strand, within PGA1_c29580 at 3093.683 kb on - strand, within PGA1_c29580 at 3093.683 kb on - strand, within PGA1_c29580 at 3093.683 kb on - strand, within PGA1_c29580 at 3093.709 kb on + strand, within PGA1_c29580 at 3093.717 kb on + strand, within PGA1_c29580 at 3093.725 kb on - strand, within PGA1_c29580 at 3093.725 kb on - strand, within PGA1_c29580 at 3093.737 kb on + strand, within PGA1_c29580 at 3093.787 kb on - strand, within PGA1_c29580 at 3093.808 kb on + strand, within PGA1_c29580 at 3093.808 kb on + strand, within PGA1_c29580 at 3093.816 kb on - strand, within PGA1_c29580 at 3093.816 kb on - strand, within PGA1_c29580 at 3093.816 kb on - strand, within PGA1_c29580 at 3093.866 kb on - strand, within PGA1_c29580 at 3093.890 kb on + strand, within PGA1_c29580 at 3093.890 kb on + strand, within PGA1_c29580 at 3093.890 kb on + strand, within PGA1_c29580 at 3093.890 kb on + strand, within PGA1_c29580 at 3093.898 kb on - strand, within PGA1_c29580 at 3093.907 kb on + strand, within PGA1_c29580 at 3094.019 kb on - strand, within PGA1_c29580 at 3094.019 kb on - strand, within PGA1_c29580 at 3094.019 kb on - strand, within PGA1_c29580 at 3094.019 kb on - strand, within PGA1_c29580 at 3094.070 kb on + strand, within PGA1_c29580 at 3094.137 kb on + strand, within PGA1_c29580 at 3094.199 kb on + strand, within PGA1_c29580 at 3094.206 kb on + strand, within PGA1_c29580 at 3094.212 kb on - strand, within PGA1_c29580 at 3094.214 kb on - strand, within PGA1_c29580 at 3094.273 kb on - strand at 3094.412 kb on + strand at 3094.449 kb on + strand at 3094.470 kb on + strand at 3094.470 kb on + strand at 3094.470 kb on + strand at 3094.478 kb on - strand at 3094.483 kb on + strand at 3094.488 kb on + strand at 3094.491 kb on - strand at 3094.498 kb on + strand at 3094.524 kb on + strand at 3094.524 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.539 kb on + strand at 3094.547 kb on - strand at 3094.547 kb on - strand at 3094.547 kb on - strand at 3094.547 kb on - strand at 3094.547 kb on - strand at 3094.558 kb on - strand at 3094.574 kb on + strand at 3094.576 kb on + strand at 3094.584 kb on - strand at 3094.584 kb on - strand at 3094.584 kb on - strand at 3094.631 kb on + strand, within PGA1_c29590 at 3094.676 kb on - strand, within PGA1_c29590 at 3094.706 kb on + strand, within PGA1_c29590 at 3094.712 kb on + strand, within PGA1_c29590 at 3094.712 kb on + strand, within PGA1_c29590 at 3094.712 kb on + strand, within PGA1_c29590 at 3094.714 kb on - strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.722 kb on + strand, within PGA1_c29590 at 3094.730 kb on - strand, within PGA1_c29590 at 3094.730 kb on - strand, within PGA1_c29590 at 3094.756 kb on - strand at 3094.773 kb on + strand at 3094.781 kb on - strand at 3094.836 kb on + strand at 3094.865 kb on + strand at 3094.869 kb on + strand at 3094.875 kb on + strand at 3094.995 kb on + strand, within PGA1_c29600 at 3095.003 kb on + strand, within PGA1_c29600 at 3095.055 kb on - strand, within PGA1_c29600 at 3095.132 kb on + strand, within PGA1_c29600 at 3095.141 kb on - strand, within PGA1_c29600 at 3095.156 kb on - strand, within PGA1_c29600 at 3095.163 kb on + strand, within PGA1_c29600 at 3095.187 kb on + strand, within PGA1_c29600 at 3095.246 kb on - strand, within PGA1_c29600 at 3095.368 kb on + strand, within PGA1_c29600 at 3095.386 kb on + strand, within PGA1_c29600 at 3095.408 kb on - strand, within PGA1_c29600 at 3095.455 kb on + strand, within PGA1_c29600 at 3095.515 kb on - strand, within PGA1_c29600 at 3095.687 kb on + strand, within PGA1_c29600 at 3095.687 kb on + strand, within PGA1_c29600 at 3095.759 kb on - strand, within PGA1_c29600
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.002 mg/ml remove 3,093,587 - PGA1_c29580 0.30 -0.3 3,093,592 + PGA1_c29580 0.30 -0.2 3,093,603 + PGA1_c29580 0.31 +0.2 3,093,611 - PGA1_c29580 0.32 -0.9 3,093,626 + PGA1_c29580 0.34 +0.1 3,093,628 - PGA1_c29580 0.34 +0.7 3,093,634 - PGA1_c29580 0.34 -0.1 3,093,634 - PGA1_c29580 0.34 -0.1 3,093,675 + PGA1_c29580 0.38 +1.3 3,093,683 - PGA1_c29580 0.39 +0.2 3,093,683 - PGA1_c29580 0.39 +0.4 3,093,683 - PGA1_c29580 0.39 +0.4 3,093,709 + PGA1_c29580 0.41 -0.1 3,093,717 + PGA1_c29580 0.42 -0.6 3,093,725 - PGA1_c29580 0.42 -0.1 3,093,725 - PGA1_c29580 0.42 -0.1 3,093,737 + PGA1_c29580 0.43 +0.8 3,093,787 - PGA1_c29580 0.48 -0.5 3,093,808 + PGA1_c29580 0.50 -0.9 3,093,808 + PGA1_c29580 0.50 -0.7 3,093,816 - PGA1_c29580 0.50 -0.3 3,093,816 - PGA1_c29580 0.50 +0.0 3,093,816 - PGA1_c29580 0.50 +1.1 3,093,866 - PGA1_c29580 0.55 +0.1 3,093,890 + PGA1_c29580 0.57 +0.3 3,093,890 + PGA1_c29580 0.57 +0.5 3,093,890 + PGA1_c29580 0.57 +0.3 3,093,890 + PGA1_c29580 0.57 +0.4 3,093,898 - PGA1_c29580 0.58 +0.4 3,093,907 + PGA1_c29580 0.59 -0.4 3,094,019 - PGA1_c29580 0.69 -0.5 3,094,019 - PGA1_c29580 0.69 +0.8 3,094,019 - PGA1_c29580 0.69 +0.9 3,094,019 - PGA1_c29580 0.69 +1.1 3,094,070 + PGA1_c29580 0.73 -0.4 3,094,137 + PGA1_c29580 0.79 +0.9 3,094,199 + PGA1_c29580 0.85 -0.2 3,094,206 + PGA1_c29580 0.85 +0.8 3,094,212 - PGA1_c29580 0.86 -1.0 3,094,214 - PGA1_c29580 0.86 +0.4 3,094,273 - +0.6 3,094,412 + +0.2 3,094,449 + -0.7 3,094,470 + -0.2 3,094,470 + +0.2 3,094,470 + -1.4 3,094,478 - -0.6 3,094,483 + -2.0 3,094,488 + +0.7 3,094,491 - +0.8 3,094,498 + -1.0 3,094,524 + +0.5 3,094,524 + -0.3 3,094,539 + -0.6 3,094,539 + -1.1 3,094,539 + -0.4 3,094,539 + +0.3 3,094,539 + -0.2 3,094,539 + -0.2 3,094,539 + -0.1 3,094,539 + +0.1 3,094,539 + -0.1 3,094,539 + +0.1 3,094,539 + -0.2 3,094,539 + +0.1 3,094,539 + +0.2 3,094,547 - -0.0 3,094,547 - +0.9 3,094,547 - +0.0 3,094,547 - +0.3 3,094,547 - +0.2 3,094,558 - -0.8 3,094,574 + +1.0 3,094,576 + -0.8 3,094,584 - -0.6 3,094,584 - +0.3 3,094,584 - -1.3 3,094,631 + PGA1_c29590 0.32 +0.1 3,094,676 - PGA1_c29590 0.55 -0.2 3,094,706 + PGA1_c29590 0.70 +0.4 3,094,712 + PGA1_c29590 0.73 -0.3 3,094,712 + PGA1_c29590 0.73 +0.7 3,094,712 + PGA1_c29590 0.73 +0.5 3,094,714 - PGA1_c29590 0.74 +2.3 3,094,722 + PGA1_c29590 0.78 -0.3 3,094,722 + PGA1_c29590 0.78 +0.5 3,094,722 + PGA1_c29590 0.78 +0.8 3,094,722 + PGA1_c29590 0.78 +1.0 3,094,722 + PGA1_c29590 0.78 -1.1 3,094,722 + PGA1_c29590 0.78 +1.2 3,094,722 + PGA1_c29590 0.78 +1.5 3,094,722 + PGA1_c29590 0.78 +0.9 3,094,730 - PGA1_c29590 0.83 +0.1 3,094,730 - PGA1_c29590 0.83 +1.7 3,094,756 - -0.1 3,094,773 + +0.3 3,094,781 - -1.9 3,094,836 + +0.3 3,094,865 + +0.2 3,094,869 + +0.7 3,094,875 + -0.5 3,094,995 + PGA1_c29600 0.21 +1.3 3,095,003 + PGA1_c29600 0.21 -0.1 3,095,055 - PGA1_c29600 0.26 -0.6 3,095,132 + PGA1_c29600 0.33 -0.3 3,095,141 - PGA1_c29600 0.34 +0.1 3,095,156 - PGA1_c29600 0.35 +0.3 3,095,163 + PGA1_c29600 0.36 +0.1 3,095,187 + PGA1_c29600 0.38 +0.4 3,095,246 - PGA1_c29600 0.43 +0.2 3,095,368 + PGA1_c29600 0.54 +1.5 3,095,386 + PGA1_c29600 0.56 -1.9 3,095,408 - PGA1_c29600 0.58 +0.9 3,095,455 + PGA1_c29600 0.62 -1.3 3,095,515 - PGA1_c29600 0.67 +0.4 3,095,687 + PGA1_c29600 0.83 -0.5 3,095,687 + PGA1_c29600 0.83 +0.2 3,095,759 - PGA1_c29600 0.89 +3.0
Or see this region's nucleotide sequence