Experiment: m.b. Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c22610 and PGA1_c22620 are separated by 17 nucleotides PGA1_c22620 and PGA1_c22630 overlap by 4 nucleotides
PGA1_c22610: PGA1_c22610 - putative transcriptional regulator, containing response regulator domain, at 2,344,005 to 2,344,721
_c22610
PGA1_c22620: PGA1_c22620 - signal transduction protein, FIST domain, at 2,344,739 to 2,345,992
_c22620
PGA1_c22630: PGA1_c22630 - signal transduction histidine kinase, at 2,345,989 to 2,348,259
_c22630
Position (kb)
2344
2345
2346 Strain fitness (log2 ratio)
-2
-1
0
1 at 2343.742 kb on - strand at 2343.794 kb on + strand at 2343.794 kb on + strand at 2343.794 kb on + strand at 2343.801 kb on + strand at 2343.802 kb on - strand at 2343.802 kb on - strand at 2343.802 kb on - strand at 2343.802 kb on - strand at 2343.802 kb on - strand at 2343.820 kb on + strand at 2343.852 kb on + strand at 2343.872 kb on + strand at 2343.898 kb on + strand at 2343.905 kb on - strand at 2343.906 kb on - strand at 2343.906 kb on - strand at 2343.955 kb on + strand at 2343.990 kb on + strand at 2344.009 kb on - strand at 2344.021 kb on + strand at 2344.030 kb on + strand at 2344.037 kb on - strand at 2344.109 kb on + strand, within PGA1_c22610 at 2344.154 kb on - strand, within PGA1_c22610 at 2344.168 kb on - strand, within PGA1_c22610 at 2344.177 kb on + strand, within PGA1_c22610 at 2344.185 kb on - strand, within PGA1_c22610 at 2344.185 kb on - strand, within PGA1_c22610 at 2344.187 kb on + strand, within PGA1_c22610 at 2344.392 kb on - strand, within PGA1_c22610 at 2344.401 kb on + strand, within PGA1_c22610 at 2344.579 kb on + strand, within PGA1_c22610 at 2344.587 kb on - strand, within PGA1_c22610 at 2344.587 kb on - strand, within PGA1_c22610 at 2344.587 kb on - strand, within PGA1_c22610 at 2344.654 kb on + strand at 2344.660 kb on + strand at 2344.668 kb on + strand at 2344.800 kb on - strand at 2344.800 kb on - strand at 2344.929 kb on + strand, within PGA1_c22620 at 2344.937 kb on - strand, within PGA1_c22620 at 2344.972 kb on - strand, within PGA1_c22620 at 2344.991 kb on - strand, within PGA1_c22620 at 2344.995 kb on + strand, within PGA1_c22620 at 2345.008 kb on - strand, within PGA1_c22620 at 2345.042 kb on - strand, within PGA1_c22620 at 2345.062 kb on + strand, within PGA1_c22620 at 2345.066 kb on + strand, within PGA1_c22620 at 2345.074 kb on - strand, within PGA1_c22620 at 2345.074 kb on - strand, within PGA1_c22620 at 2345.112 kb on + strand, within PGA1_c22620 at 2345.150 kb on - strand, within PGA1_c22620 at 2345.263 kb on - strand, within PGA1_c22620 at 2345.311 kb on + strand, within PGA1_c22620 at 2345.311 kb on + strand, within PGA1_c22620 at 2345.404 kb on + strand, within PGA1_c22620 at 2345.431 kb on + strand, within PGA1_c22620 at 2345.447 kb on - strand, within PGA1_c22620 at 2345.520 kb on - strand, within PGA1_c22620 at 2345.562 kb on - strand, within PGA1_c22620 at 2345.609 kb on - strand, within PGA1_c22620 at 2345.648 kb on - strand, within PGA1_c22620 at 2345.746 kb on - strand, within PGA1_c22620 at 2345.755 kb on + strand, within PGA1_c22620 at 2345.852 kb on - strand, within PGA1_c22620 at 2345.908 kb on + strand at 2345.916 kb on - strand at 2345.916 kb on - strand at 2345.916 kb on - strand at 2345.936 kb on - strand at 2345.973 kb on + strand at 2345.981 kb on + strand at 2346.010 kb on - strand at 2346.092 kb on - strand at 2346.095 kb on + strand at 2346.100 kb on + strand at 2346.100 kb on + strand at 2346.113 kb on - strand at 2346.179 kb on + strand at 2346.179 kb on + strand at 2346.179 kb on + strand at 2346.187 kb on - strand at 2346.314 kb on - strand, within PGA1_c22630 at 2346.376 kb on + strand, within PGA1_c22630 at 2346.410 kb on + strand, within PGA1_c22630 at 2346.487 kb on - strand, within PGA1_c22630 at 2346.532 kb on - strand, within PGA1_c22630 at 2346.540 kb on - strand, within PGA1_c22630 at 2346.629 kb on - strand, within PGA1_c22630 at 2346.686 kb on - strand, within PGA1_c22630 at 2346.729 kb on - strand, within PGA1_c22630 at 2346.880 kb on + strand, within PGA1_c22630 at 2346.909 kb on + strand, within PGA1_c22630 at 2346.960 kb on + strand, within PGA1_c22630 at 2346.980 kb on - strand, within PGA1_c22630
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.002 mg/ml remove 2,343,742 - -2.7 2,343,794 + -0.1 2,343,794 + +0.0 2,343,794 + -0.1 2,343,801 + +0.0 2,343,802 - -1.3 2,343,802 - -0.9 2,343,802 - +1.0 2,343,802 - +0.4 2,343,802 - +0.5 2,343,820 + +0.0 2,343,852 + +0.2 2,343,872 + -2.4 2,343,898 + -0.0 2,343,905 - -1.1 2,343,906 - -1.8 2,343,906 - +0.6 2,343,955 + -0.1 2,343,990 + +0.3 2,344,009 - +1.2 2,344,021 + +0.7 2,344,030 + +1.4 2,344,037 - +0.1 2,344,109 + PGA1_c22610 0.15 +0.3 2,344,154 - PGA1_c22610 0.21 +1.6 2,344,168 - PGA1_c22610 0.23 -0.1 2,344,177 + PGA1_c22610 0.24 +0.4 2,344,185 - PGA1_c22610 0.25 -0.2 2,344,185 - PGA1_c22610 0.25 +0.5 2,344,187 + PGA1_c22610 0.25 +0.2 2,344,392 - PGA1_c22610 0.54 -0.5 2,344,401 + PGA1_c22610 0.55 +1.0 2,344,579 + PGA1_c22610 0.80 +0.1 2,344,587 - PGA1_c22610 0.81 -0.6 2,344,587 - PGA1_c22610 0.81 -1.6 2,344,587 - PGA1_c22610 0.81 -1.9 2,344,654 + +0.9 2,344,660 + +1.3 2,344,668 + +0.0 2,344,800 - -1.5 2,344,800 - -0.4 2,344,929 + PGA1_c22620 0.15 +1.6 2,344,937 - PGA1_c22620 0.16 +0.7 2,344,972 - PGA1_c22620 0.19 +0.1 2,344,991 - PGA1_c22620 0.20 +0.4 2,344,995 + PGA1_c22620 0.20 +1.1 2,345,008 - PGA1_c22620 0.21 +0.8 2,345,042 - PGA1_c22620 0.24 -0.9 2,345,062 + PGA1_c22620 0.26 -1.0 2,345,066 + PGA1_c22620 0.26 +0.5 2,345,074 - PGA1_c22620 0.27 -0.6 2,345,074 - PGA1_c22620 0.27 -0.0 2,345,112 + PGA1_c22620 0.30 +1.1 2,345,150 - PGA1_c22620 0.33 +0.8 2,345,263 - PGA1_c22620 0.42 -1.4 2,345,311 + PGA1_c22620 0.46 -0.1 2,345,311 + PGA1_c22620 0.46 +0.5 2,345,404 + PGA1_c22620 0.53 -0.1 2,345,431 + PGA1_c22620 0.55 -0.5 2,345,447 - PGA1_c22620 0.56 -0.7 2,345,520 - PGA1_c22620 0.62 -0.4 2,345,562 - PGA1_c22620 0.66 -0.3 2,345,609 - PGA1_c22620 0.69 -0.6 2,345,648 - PGA1_c22620 0.72 +1.1 2,345,746 - PGA1_c22620 0.80 +0.9 2,345,755 + PGA1_c22620 0.81 +1.3 2,345,852 - PGA1_c22620 0.89 +0.3 2,345,908 + -2.0 2,345,916 - -0.8 2,345,916 - +0.2 2,345,916 - -0.2 2,345,936 - -0.5 2,345,973 + +0.2 2,345,981 + +0.0 2,346,010 - -0.0 2,346,092 - -1.0 2,346,095 + +0.6 2,346,100 + -1.0 2,346,100 + -0.6 2,346,113 - +0.6 2,346,179 + -1.5 2,346,179 + -0.2 2,346,179 + -0.9 2,346,187 - +0.2 2,346,314 - PGA1_c22630 0.14 +0.1 2,346,376 + PGA1_c22630 0.17 +0.2 2,346,410 + PGA1_c22630 0.19 +0.9 2,346,487 - PGA1_c22630 0.22 -0.6 2,346,532 - PGA1_c22630 0.24 -0.3 2,346,540 - PGA1_c22630 0.24 +0.7 2,346,629 - PGA1_c22630 0.28 +0.9 2,346,686 - PGA1_c22630 0.31 +0.8 2,346,729 - PGA1_c22630 0.33 +0.2 2,346,880 + PGA1_c22630 0.39 +0.2 2,346,909 + PGA1_c22630 0.41 +0.4 2,346,960 + PGA1_c22630 0.43 +0.1 2,346,980 - PGA1_c22630 0.44 -0.6
Or see this region's nucleotide sequence