Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17000
Experiment: m.b. Thallium(I) acetate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.002 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,775,236 | + | -3.1 | |||
| 1,775,236 | + | -0.2 | |||
| 1,775,236 | + | +0.3 | |||
| 1,775,244 | - | -2.2 | |||
| 1,775,262 | - | +0.1 | |||
| 1,775,315 | - | +0.9 | |||
| 1,775,315 | - | +1.7 | |||
| 1,775,315 | - | -0.1 | |||
| 1,775,621 | - | PGA1_c16990 | 0.46 | -0.3 | |
| 1,775,696 | - | PGA1_c16990 | 0.55 | +0.1 | |
| 1,775,754 | + | PGA1_c16990 | 0.63 | +0.2 | |
| 1,775,764 | + | PGA1_c16990 | 0.64 | +0.7 | |
| 1,775,772 | - | PGA1_c16990 | 0.65 | -0.6 | |
| 1,775,797 | + | PGA1_c16990 | 0.68 | -1.0 | |
| 1,775,851 | + | PGA1_c16990 | 0.75 | +1.1 | |
| 1,775,864 | - | PGA1_c16990 | 0.77 | +0.1 | |
| 1,775,866 | + | PGA1_c16990 | 0.77 | -0.4 | |
| 1,775,955 | - | PGA1_c16990 | 0.89 | -1.8 | |
| 1,776,056 | - | +0.1 | |||
| 1,776,125 | - | -0.2 | |||
| 1,776,125 | - | +0.4 | |||
| 1,776,125 | - | +0.6 | |||
| 1,776,173 | + | +1.4 | |||
| 1,776,181 | - | +0.7 | |||
| 1,776,212 | + | -0.2 |
Or see this region's nucleotide sequence