Experiment: MoYLS4 with FCCP 2uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3131 and DVU3132 overlap by 4 nucleotides DVU3132 and glpF are separated by 107 nucleotides
DVU3131: DVU3131 - transcriptional regulator, putative (TIGR), at 3,277,423 to 3,278,370
DVU3131
DVU3132: DVU3132 - glycerol-3-phosphate dehydrogenase, FAD-dependent (TIGR), at 3,278,367 to 3,280,007
DVU3132
DVU3133: glpF - glycerol uptake facilitator protein (TIGR), at 3,280,115 to 3,280,870
glpF
Position (kb)
3278
3279
3280
3281 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3277.634 kb on - strand, within DVU3131 at 3277.754 kb on - strand, within DVU3131 at 3277.767 kb on + strand, within DVU3131 at 3277.820 kb on + strand, within DVU3131 at 3277.828 kb on - strand, within DVU3131 at 3277.896 kb on + strand, within DVU3131 at 3277.905 kb on - strand, within DVU3131 at 3277.946 kb on + strand, within DVU3131 at 3277.954 kb on - strand, within DVU3131 at 3277.983 kb on + strand, within DVU3131 at 3277.983 kb on + strand, within DVU3131 at 3277.991 kb on - strand, within DVU3131 at 3278.025 kb on - strand, within DVU3131 at 3278.148 kb on - strand, within DVU3131 at 3278.214 kb on + strand, within DVU3131 at 3278.214 kb on + strand, within DVU3131 at 3278.221 kb on + strand, within DVU3131 at 3278.292 kb on - strand at 3278.349 kb on + strand at 3278.364 kb on + strand at 3278.372 kb on - strand at 3278.420 kb on + strand at 3278.479 kb on + strand at 3278.493 kb on + strand at 3278.566 kb on + strand, within DVU3132 at 3278.566 kb on + strand, within DVU3132 at 3278.574 kb on - strand, within DVU3132 at 3278.582 kb on + strand, within DVU3132 at 3278.615 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.636 kb on + strand, within DVU3132 at 3278.651 kb on - strand, within DVU3132 at 3278.674 kb on - strand, within DVU3132 at 3278.747 kb on - strand, within DVU3132 at 3278.762 kb on + strand, within DVU3132 at 3278.775 kb on - strand, within DVU3132 at 3278.845 kb on - strand, within DVU3132 at 3278.850 kb on + strand, within DVU3132 at 3278.896 kb on + strand, within DVU3132 at 3278.949 kb on - strand, within DVU3132 at 3278.978 kb on + strand, within DVU3132 at 3278.991 kb on + strand, within DVU3132 at 3278.999 kb on - strand, within DVU3132 at 3278.999 kb on - strand, within DVU3132 at 3279.000 kb on + strand, within DVU3132 at 3279.052 kb on + strand, within DVU3132 at 3279.117 kb on - strand, within DVU3132 at 3279.156 kb on + strand, within DVU3132 at 3279.209 kb on + strand, within DVU3132 at 3279.229 kb on + strand, within DVU3132 at 3279.266 kb on - strand, within DVU3132 at 3279.510 kb on + strand, within DVU3132 at 3279.547 kb on + strand, within DVU3132 at 3279.580 kb on + strand, within DVU3132 at 3279.588 kb on - strand, within DVU3132 at 3279.588 kb on - strand, within DVU3132 at 3279.588 kb on - strand, within DVU3132 at 3279.603 kb on - strand, within DVU3132 at 3279.702 kb on - strand, within DVU3132 at 3279.706 kb on + strand, within DVU3132 at 3279.706 kb on + strand, within DVU3132 at 3279.714 kb on - strand, within DVU3132 at 3279.714 kb on - strand, within DVU3132 at 3279.724 kb on + strand, within DVU3132 at 3279.743 kb on + strand, within DVU3132 at 3279.761 kb on - strand, within DVU3132 at 3279.766 kb on - strand, within DVU3132 at 3279.791 kb on + strand, within DVU3132 at 3279.804 kb on + strand, within DVU3132 at 3279.837 kb on + strand, within DVU3132 at 3279.846 kb on + strand at 3279.858 kb on + strand at 3279.858 kb on + strand at 3279.868 kb on + strand at 3279.868 kb on + strand at 3279.868 kb on + strand at 3279.868 kb on + strand at 3279.868 kb on + strand at 3279.876 kb on - strand at 3279.876 kb on - strand at 3279.909 kb on + strand at 3280.027 kb on + strand at 3280.046 kb on - strand at 3280.223 kb on + strand, within glpF at 3280.297 kb on + strand, within glpF at 3280.305 kb on - strand, within glpF at 3280.375 kb on + strand, within glpF at 3280.458 kb on - strand, within glpF at 3280.460 kb on + strand, within glpF at 3280.463 kb on - strand, within glpF at 3280.468 kb on - strand, within glpF at 3280.598 kb on + strand, within glpF at 3280.788 kb on - strand, within glpF at 3280.859 kb on + strand at 3280.859 kb on + strand at 3280.859 kb on + strand at 3280.867 kb on - strand at 3280.867 kb on - strand at 3280.867 kb on - strand at 3280.879 kb on - strand at 3280.919 kb on + strand at 3280.921 kb on + strand at 3280.973 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with FCCP 2uM remove 3,277,634 - DVU3131 0.22 -0.1 3,277,754 - DVU3131 0.35 -0.8 3,277,767 + DVU3131 0.36 -0.7 3,277,820 + DVU3131 0.42 -0.1 3,277,828 - DVU3131 0.43 -0.8 3,277,896 + DVU3131 0.50 -0.7 3,277,905 - DVU3131 0.51 +0.1 3,277,946 + DVU3131 0.55 +1.5 3,277,954 - DVU3131 0.56 -0.0 3,277,983 + DVU3131 0.59 -0.5 3,277,983 + DVU3131 0.59 +0.3 3,277,991 - DVU3131 0.60 -0.1 3,278,025 - DVU3131 0.64 +1.9 3,278,148 - DVU3131 0.76 -0.2 3,278,214 + DVU3131 0.83 -0.1 3,278,214 + DVU3131 0.83 +0.5 3,278,221 + DVU3131 0.84 +0.4 3,278,292 - +0.4 3,278,349 + +0.3 3,278,364 + +0.3 3,278,372 - +0.4 3,278,420 + +0.9 3,278,479 + +0.9 3,278,493 + -0.1 3,278,566 + DVU3132 0.12 -1.6 3,278,566 + DVU3132 0.12 -0.1 3,278,574 - DVU3132 0.13 -1.1 3,278,582 + DVU3132 0.13 -0.9 3,278,615 + DVU3132 0.15 +0.3 3,278,636 + DVU3132 0.16 -0.1 3,278,636 + DVU3132 0.16 -0.2 3,278,636 + DVU3132 0.16 +2.4 3,278,636 + DVU3132 0.16 -0.7 3,278,651 - DVU3132 0.17 +0.9 3,278,674 - DVU3132 0.19 +1.4 3,278,747 - DVU3132 0.23 +0.9 3,278,762 + DVU3132 0.24 -0.4 3,278,775 - DVU3132 0.25 +0.9 3,278,845 - DVU3132 0.29 -0.5 3,278,850 + DVU3132 0.29 +0.5 3,278,896 + DVU3132 0.32 -1.0 3,278,949 - DVU3132 0.35 -1.1 3,278,978 + DVU3132 0.37 +0.2 3,278,991 + DVU3132 0.38 +0.9 3,278,999 - DVU3132 0.39 +0.5 3,278,999 - DVU3132 0.39 -0.9 3,279,000 + DVU3132 0.39 -0.2 3,279,052 + DVU3132 0.42 -0.8 3,279,117 - DVU3132 0.46 -1.7 3,279,156 + DVU3132 0.48 -0.2 3,279,209 + DVU3132 0.51 -0.3 3,279,229 + DVU3132 0.53 -0.9 3,279,266 - DVU3132 0.55 -0.4 3,279,510 + DVU3132 0.70 -0.9 3,279,547 + DVU3132 0.72 -0.7 3,279,580 + DVU3132 0.74 +0.1 3,279,588 - DVU3132 0.74 -1.7 3,279,588 - DVU3132 0.74 -1.5 3,279,588 - DVU3132 0.74 -0.3 3,279,603 - DVU3132 0.75 -0.6 3,279,702 - DVU3132 0.81 +0.3 3,279,706 + DVU3132 0.82 +0.6 3,279,706 + DVU3132 0.82 -0.0 3,279,714 - DVU3132 0.82 -0.0 3,279,714 - DVU3132 0.82 +0.2 3,279,724 + DVU3132 0.83 -0.1 3,279,743 + DVU3132 0.84 -0.1 3,279,761 - DVU3132 0.85 -0.4 3,279,766 - DVU3132 0.85 +0.1 3,279,791 + DVU3132 0.87 +1.4 3,279,804 + DVU3132 0.88 +0.1 3,279,837 + DVU3132 0.90 +0.9 3,279,846 + +0.9 3,279,858 + -0.1 3,279,858 + -0.4 3,279,868 + +0.4 3,279,868 + +0.1 3,279,868 + +0.3 3,279,868 + +0.0 3,279,868 + -0.6 3,279,876 - -0.3 3,279,876 - -0.4 3,279,909 + -0.9 3,280,027 + -0.2 3,280,046 - -1.6 3,280,223 + glpF DVU3133 0.14 -2.0 3,280,297 + glpF DVU3133 0.24 -0.1 3,280,305 - glpF DVU3133 0.25 -1.1 3,280,375 + glpF DVU3133 0.34 -0.7 3,280,458 - glpF DVU3133 0.45 +0.9 3,280,460 + glpF DVU3133 0.46 -1.1 3,280,463 - glpF DVU3133 0.46 +0.9 3,280,468 - glpF DVU3133 0.47 +0.9 3,280,598 + glpF DVU3133 0.64 -0.5 3,280,788 - glpF DVU3133 0.89 +1.9 3,280,859 + -2.0 3,280,859 + +1.9 3,280,859 + -0.4 3,280,867 - +0.9 3,280,867 - +0.9 3,280,867 - +0.9 3,280,879 - -0.7 3,280,919 + +0.3 3,280,921 + +0.3 3,280,973 + -3.7
Or see this region's nucleotide sequence