Experiment: MoYLS4 with FCCP 2uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2978 and DVU2979 are separated by 109 nucleotides DVU2979 and pssA are separated by 62 nucleotides pssA and leuA are separated by 176 nucleotides
DVU2978: DVU2978 - hydrolase, haloacid dehalogenase-like family (TIGR), at 3,085,457 to 3,086,089
DVU2978
DVU2979: DVU2979 - phosphatidylserine decarboxylase-related protein (TIGR), at 3,086,199 to 3,086,852
DVU2979
DVU2980: pssA - CDP-diacylglycerol--serine O-phosphatidyltransferase (TIGR), at 3,086,915 to 3,087,664
pssA
DVU2981: leuA - 2-isopropylmalate synthase (TIGR), at 3,087,841 to 3,089,370
leuA
Position (kb)
3086
3087 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3085.245 kb on + strand at 3085.247 kb on + strand at 3085.249 kb on + strand at 3085.275 kb on - strand at 3085.304 kb on - strand at 3085.311 kb on - strand at 3085.338 kb on + strand at 3085.346 kb on - strand at 3085.357 kb on - strand at 3085.383 kb on + strand at 3085.388 kb on + strand at 3085.388 kb on + strand at 3085.410 kb on + strand at 3085.410 kb on + strand at 3085.446 kb on - strand at 3085.456 kb on - strand at 3085.473 kb on - strand at 3085.588 kb on - strand, within DVU2978 at 3085.588 kb on - strand, within DVU2978 at 3085.601 kb on - strand, within DVU2978 at 3085.606 kb on + strand, within DVU2978 at 3085.640 kb on - strand, within DVU2978 at 3085.669 kb on - strand, within DVU2978 at 3085.705 kb on + strand, within DVU2978 at 3085.709 kb on - strand, within DVU2978 at 3085.777 kb on + strand, within DVU2978 at 3085.777 kb on + strand, within DVU2978 at 3085.797 kb on + strand, within DVU2978 at 3085.797 kb on + strand, within DVU2978 at 3085.803 kb on - strand, within DVU2978 at 3085.805 kb on - strand, within DVU2978 at 3085.815 kb on + strand, within DVU2978 at 3085.859 kb on + strand, within DVU2978 at 3085.867 kb on - strand, within DVU2978 at 3085.902 kb on + strand, within DVU2978 at 3085.910 kb on + strand, within DVU2978 at 3085.910 kb on - strand, within DVU2978 at 3085.918 kb on - strand, within DVU2978 at 3085.952 kb on - strand, within DVU2978 at 3085.952 kb on - strand, within DVU2978 at 3086.085 kb on - strand at 3086.156 kb on - strand at 3086.816 kb on + strand at 3086.842 kb on - strand at 3086.854 kb on - strand at 3086.854 kb on - strand at 3086.854 kb on - strand at 3086.854 kb on - strand at 3087.654 kb on + strand at 3087.654 kb on + strand at 3087.724 kb on + strand at 3087.823 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with FCCP 2uM remove 3,085,245 + -1.7 3,085,247 + -0.9 3,085,249 + +0.0 3,085,275 - -1.4 3,085,304 - -0.4 3,085,311 - -0.6 3,085,338 + +0.3 3,085,346 - +1.2 3,085,357 - -0.0 3,085,383 + +0.7 3,085,388 + +0.3 3,085,388 + -0.1 3,085,410 + -0.7 3,085,410 + +0.1 3,085,446 - +0.1 3,085,456 - -0.3 3,085,473 - -0.5 3,085,588 - DVU2978 0.21 -1.1 3,085,588 - DVU2978 0.21 -0.7 3,085,601 - DVU2978 0.23 +0.7 3,085,606 + DVU2978 0.24 -0.0 3,085,640 - DVU2978 0.29 -0.4 3,085,669 - DVU2978 0.33 +0.2 3,085,705 + DVU2978 0.39 +0.0 3,085,709 - DVU2978 0.40 -0.1 3,085,777 + DVU2978 0.51 +0.2 3,085,777 + DVU2978 0.51 -0.2 3,085,797 + DVU2978 0.54 -0.4 3,085,797 + DVU2978 0.54 +0.5 3,085,803 - DVU2978 0.55 -0.7 3,085,805 - DVU2978 0.55 -1.8 3,085,815 + DVU2978 0.57 +0.3 3,085,859 + DVU2978 0.64 +2.5 3,085,867 - DVU2978 0.65 -0.7 3,085,902 + DVU2978 0.70 +0.9 3,085,910 + DVU2978 0.72 -0.4 3,085,910 - DVU2978 0.72 -0.1 3,085,918 - DVU2978 0.73 -0.1 3,085,952 - DVU2978 0.78 +0.9 3,085,952 - DVU2978 0.78 -0.1 3,086,085 - -0.4 3,086,156 - +0.9 3,086,816 + -0.7 3,086,842 - -0.1 3,086,854 - +0.9 3,086,854 - -1.4 3,086,854 - -1.2 3,086,854 - +0.9 3,087,654 + -0.4 3,087,654 + -1.5 3,087,724 + +0.9 3,087,823 + +0.3
Or see this region's nucleotide sequence