Experiment: MoYLS4 with FCCP 2uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1782 and DVU1783 overlap by 8 nucleotides DVU1783 and DVU1784 are separated by 171 nucleotides DVU1784 and DVU1785 are separated by 203 nucleotides
DVU1782: DVU1782 - iron-sulfur cluster-binding protein (TIGR), at 1,844,586 to 1,846,013
DVU1782
DVU1783: DVU1783 - cysteine-rich domain protein (TIGR), at 1,846,006 to 1,846,758
DVU1783
DVU1784: DVU1784 - oxidoreductase, short-chain dehydrogenase/reductase family (TIGR), at 1,846,930 to 1,847,691
DVU1784
DVU1785: DVU1785 - membrane protein, MarC family (TIGR), at 1,847,895 to 1,848,497
DVU1785
Position (kb)
1846
1847
1848 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1845.998 kb on - strand at 1846.033 kb on - strand at 1846.048 kb on + strand at 1846.048 kb on + strand at 1846.053 kb on + strand at 1846.243 kb on + strand, within DVU1783 at 1846.314 kb on + strand, within DVU1783 at 1846.355 kb on + strand, within DVU1783 at 1846.491 kb on - strand, within DVU1783 at 1846.528 kb on - strand, within DVU1783 at 1846.618 kb on - strand, within DVU1783 at 1846.633 kb on + strand, within DVU1783 at 1846.730 kb on + strand at 1846.738 kb on - strand at 1846.738 kb on - strand at 1846.768 kb on - strand at 1846.787 kb on + strand at 1846.886 kb on + strand at 1846.914 kb on + strand at 1846.929 kb on - strand at 1846.930 kb on + strand at 1846.938 kb on - strand at 1847.079 kb on - strand, within DVU1784 at 1847.099 kb on - strand, within DVU1784 at 1847.109 kb on + strand, within DVU1784 at 1847.142 kb on + strand, within DVU1784 at 1847.256 kb on + strand, within DVU1784 at 1847.276 kb on + strand, within DVU1784 at 1847.394 kb on - strand, within DVU1784 at 1847.428 kb on + strand, within DVU1784 at 1847.433 kb on + strand, within DVU1784 at 1847.543 kb on - strand, within DVU1784 at 1847.657 kb on - strand at 1847.722 kb on + strand at 1847.807 kb on + strand at 1847.959 kb on + strand, within DVU1785 at 1847.990 kb on - strand, within DVU1785 at 1848.130 kb on + strand, within DVU1785 at 1848.164 kb on - strand, within DVU1785 at 1848.220 kb on - strand, within DVU1785 at 1848.300 kb on + strand, within DVU1785 at 1848.368 kb on - strand, within DVU1785 at 1848.426 kb on - strand, within DVU1785 at 1848.475 kb on - strand at 1848.505 kb on - strand at 1848.553 kb on - strand at 1848.654 kb on + strand at 1848.662 kb on - strand at 1848.671 kb on + strand at 1848.679 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with FCCP 2uM remove 1,845,998 - +1.2 1,846,033 - -0.1 1,846,048 + +0.6 1,846,048 + +0.2 1,846,053 + -0.3 1,846,243 + DVU1783 0.31 +2.1 1,846,314 + DVU1783 0.41 -0.5 1,846,355 + DVU1783 0.46 -0.4 1,846,491 - DVU1783 0.64 -2.9 1,846,528 - DVU1783 0.69 -0.3 1,846,618 - DVU1783 0.81 -0.1 1,846,633 + DVU1783 0.83 +0.1 1,846,730 + -0.1 1,846,738 - +0.3 1,846,738 - -0.9 1,846,768 - -2.1 1,846,787 + -0.1 1,846,886 + -0.1 1,846,914 + +1.2 1,846,929 - -0.7 1,846,930 + +0.0 1,846,938 - +1.1 1,847,079 - DVU1784 0.20 -0.2 1,847,099 - DVU1784 0.22 -0.2 1,847,109 + DVU1784 0.23 -0.5 1,847,142 + DVU1784 0.28 +0.1 1,847,256 + DVU1784 0.43 +1.6 1,847,276 + DVU1784 0.45 -0.1 1,847,394 - DVU1784 0.61 -0.3 1,847,428 + DVU1784 0.65 -0.4 1,847,433 + DVU1784 0.66 +2.6 1,847,543 - DVU1784 0.80 -2.6 1,847,657 - -1.7 1,847,722 + +0.9 1,847,807 + +0.6 1,847,959 + DVU1785 0.11 -0.7 1,847,990 - DVU1785 0.16 +0.1 1,848,130 + DVU1785 0.39 +0.1 1,848,164 - DVU1785 0.45 -0.1 1,848,220 - DVU1785 0.54 +0.8 1,848,300 + DVU1785 0.67 +0.1 1,848,368 - DVU1785 0.78 -0.1 1,848,426 - DVU1785 0.88 -1.5 1,848,475 - +1.1 1,848,505 - +2.6 1,848,553 - -0.8 1,848,654 + -0.1 1,848,662 - +0.0 1,848,671 + +0.1 1,848,679 - -1.5
Or see this region's nucleotide sequence