Experiment: 2-furoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04388 and H281DRAFT_04389 are separated by 82 nucleotides H281DRAFT_04389 and H281DRAFT_04390 are separated by 98 nucleotides
H281DRAFT_04388: H281DRAFT_04388 - trehalose 6-phosphatase (EC 3.1.3.12), at 101,215 to 101,964
_04388
H281DRAFT_04389: H281DRAFT_04389 - trehalose 6-phosphate synthase, at 102,047 to 103,507
_04389
H281DRAFT_04390: H281DRAFT_04390 - ATP-binding cassette, subfamily B, at 103,606 to 105,528
_04390
Position (kb) 102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 101.681 kb on - strand, within H281DRAFT_04388 at 101.681 kb on - strand, within H281DRAFT_04388 at 101.992 kb on + strand at 101.992 kb on + strand at 101.992 kb on + strand at 101.993 kb on - strand at 101.993 kb on - strand at 101.993 kb on - strand at 102.008 kb on + strand at 102.009 kb on - strand at 102.009 kb on - strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.027 kb on + strand at 102.028 kb on - strand at 102.028 kb on - strand at 102.062 kb on - strand at 102.279 kb on - strand, within H281DRAFT_04389 at 102.341 kb on + strand, within H281DRAFT_04389 at 102.366 kb on - strand, within H281DRAFT_04389 at 102.412 kb on - strand, within H281DRAFT_04389 at 102.426 kb on + strand, within H281DRAFT_04389 at 102.426 kb on + strand, within H281DRAFT_04389 at 102.427 kb on - strand, within H281DRAFT_04389 at 102.427 kb on - strand, within H281DRAFT_04389 at 102.570 kb on + strand, within H281DRAFT_04389 at 102.571 kb on - strand, within H281DRAFT_04389 at 102.746 kb on + strand, within H281DRAFT_04389 at 102.814 kb on + strand, within H281DRAFT_04389 at 102.814 kb on + strand, within H281DRAFT_04389 at 102.860 kb on + strand, within H281DRAFT_04389 at 102.861 kb on - strand, within H281DRAFT_04389 at 102.983 kb on + strand, within H281DRAFT_04389 at 102.984 kb on - strand, within H281DRAFT_04389 at 102.984 kb on - strand, within H281DRAFT_04389 at 103.067 kb on + strand, within H281DRAFT_04389 at 103.067 kb on + strand, within H281DRAFT_04389 at 103.075 kb on + strand, within H281DRAFT_04389 at 103.075 kb on + strand, within H281DRAFT_04389 at 103.075 kb on + strand, within H281DRAFT_04389 at 103.076 kb on - strand, within H281DRAFT_04389 at 103.083 kb on - strand, within H281DRAFT_04389 at 103.175 kb on + strand, within H281DRAFT_04389 at 103.175 kb on + strand, within H281DRAFT_04389 at 103.175 kb on + strand, within H281DRAFT_04389 at 103.176 kb on - strand, within H281DRAFT_04389 at 103.176 kb on - strand, within H281DRAFT_04389 at 103.555 kb on + strand at 103.577 kb on + strand at 103.612 kb on - strand at 103.612 kb on - strand at 103.992 kb on + strand, within H281DRAFT_04390 at 104.225 kb on + strand, within H281DRAFT_04390
Per-strain Table
Position Strand Gene LocusTag Fraction 2-furoic (C) remove 101,681 - H281DRAFT_04388 0.62 -3.5 101,681 - H281DRAFT_04388 0.62 +0.2 101,992 + +0.8 101,992 + +2.3 101,992 + -0.1 101,993 - +0.3 101,993 - +0.8 101,993 - +0.3 102,008 + +0.0 102,009 - +0.1 102,009 - +0.4 102,027 + -0.0 102,027 + +0.6 102,027 + +0.1 102,027 + +0.5 102,027 + +0.9 102,028 - -0.8 102,028 - -0.0 102,062 - -0.7 102,279 - H281DRAFT_04389 0.16 +0.0 102,341 + H281DRAFT_04389 0.20 -0.3 102,366 - H281DRAFT_04389 0.22 +0.2 102,412 - H281DRAFT_04389 0.25 -0.0 102,426 + H281DRAFT_04389 0.26 +0.7 102,426 + H281DRAFT_04389 0.26 -0.0 102,427 - H281DRAFT_04389 0.26 +0.5 102,427 - H281DRAFT_04389 0.26 +0.2 102,570 + H281DRAFT_04389 0.36 +0.7 102,571 - H281DRAFT_04389 0.36 -0.1 102,746 + H281DRAFT_04389 0.48 -0.3 102,814 + H281DRAFT_04389 0.52 +0.2 102,814 + H281DRAFT_04389 0.52 +0.4 102,860 + H281DRAFT_04389 0.56 +0.0 102,861 - H281DRAFT_04389 0.56 -0.7 102,983 + H281DRAFT_04389 0.64 -0.2 102,984 - H281DRAFT_04389 0.64 +0.1 102,984 - H281DRAFT_04389 0.64 +0.4 103,067 + H281DRAFT_04389 0.70 +2.6 103,067 + H281DRAFT_04389 0.70 -0.7 103,075 + H281DRAFT_04389 0.70 +0.0 103,075 + H281DRAFT_04389 0.70 +0.4 103,075 + H281DRAFT_04389 0.70 +0.2 103,076 - H281DRAFT_04389 0.70 +0.2 103,083 - H281DRAFT_04389 0.71 +0.8 103,175 + H281DRAFT_04389 0.77 -0.2 103,175 + H281DRAFT_04389 0.77 +0.3 103,175 + H281DRAFT_04389 0.77 +0.2 103,176 - H281DRAFT_04389 0.77 +0.1 103,176 - H281DRAFT_04389 0.77 -0.3 103,555 + +0.2 103,577 + +0.1 103,612 - +0.3 103,612 - +0.0 103,992 + H281DRAFT_04390 0.20 +1.8 104,225 + H281DRAFT_04390 0.32 +0.8
Or see this region's nucleotide sequence