Experiment: 2-furoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03604 and H281DRAFT_03605 are separated by 661 nucleotides H281DRAFT_03605 and H281DRAFT_03606 overlap by 8 nucleotides H281DRAFT_03606 and H281DRAFT_03607 overlap by 4 nucleotides
H281DRAFT_03604: H281DRAFT_03604 - Signal transduction histidine kinase, at 111,648 to 113,930
_03604
H281DRAFT_03605: H281DRAFT_03605 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 114,592 to 114,960
_03605
H281DRAFT_03606: H281DRAFT_03606 - CheC, inhibitor of MCP methylation, at 114,953 to 115,576
_03606
H281DRAFT_03607: H281DRAFT_03607 - PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein, at 115,573 to 116,511
_03607
Position (kb)
114
115 Strain fitness (log2 ratio)
-2
-1
0
1 at 113.649 kb on + strand, within H281DRAFT_03604 at 113.650 kb on - strand, within H281DRAFT_03604 at 113.650 kb on - strand, within H281DRAFT_03604 at 113.650 kb on - strand, within H281DRAFT_03604 at 113.650 kb on - strand, within H281DRAFT_03604 at 113.717 kb on + strand at 113.718 kb on - strand at 113.718 kb on - strand at 113.718 kb on - strand at 113.718 kb on - strand at 113.774 kb on - strand at 113.935 kb on + strand at 113.936 kb on - strand at 113.984 kb on + strand at 113.985 kb on - strand at 113.985 kb on - strand at 114.013 kb on + strand at 114.042 kb on + strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.058 kb on - strand at 114.088 kb on + strand at 114.165 kb on + strand at 114.166 kb on - strand at 114.192 kb on + strand at 114.193 kb on - strand at 114.250 kb on + strand at 114.293 kb on + strand at 114.369 kb on + strand at 114.370 kb on - strand at 114.395 kb on + strand at 114.396 kb on - strand at 114.396 kb on - strand at 114.396 kb on - strand at 114.396 kb on - strand at 114.495 kb on - strand at 114.495 kb on - strand at 114.571 kb on + strand at 114.571 kb on + strand at 114.572 kb on - strand at 114.572 kb on - strand at 114.685 kb on + strand, within H281DRAFT_03605 at 114.685 kb on + strand, within H281DRAFT_03605 at 114.685 kb on + strand, within H281DRAFT_03605 at 114.685 kb on + strand, within H281DRAFT_03605 at 114.718 kb on + strand, within H281DRAFT_03605 at 114.719 kb on - strand, within H281DRAFT_03605 at 114.779 kb on - strand, within H281DRAFT_03605 at 114.870 kb on - strand, within H281DRAFT_03605 at 114.924 kb on - strand at 114.943 kb on + strand at 114.944 kb on - strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 115.068 kb on + strand, within H281DRAFT_03606 at 115.069 kb on - strand, within H281DRAFT_03606 at 115.136 kb on - strand, within H281DRAFT_03606 at 115.253 kb on + strand, within H281DRAFT_03606 at 115.254 kb on - strand, within H281DRAFT_03606 at 115.268 kb on + strand, within H281DRAFT_03606 at 115.584 kb on + strand at 115.677 kb on + strand, within H281DRAFT_03607 at 115.677 kb on + strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.797 kb on + strand, within H281DRAFT_03607 at 115.797 kb on + strand, within H281DRAFT_03607 at 115.798 kb on - strand, within H281DRAFT_03607 at 115.831 kb on + strand, within H281DRAFT_03607 at 115.831 kb on + strand, within H281DRAFT_03607 at 115.831 kb on + strand, within H281DRAFT_03607 at 115.832 kb on - strand, within H281DRAFT_03607 at 115.832 kb on - strand, within H281DRAFT_03607 at 115.832 kb on - strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607
Per-strain Table
Position Strand Gene LocusTag Fraction 2-furoic (C) remove 113,649 + H281DRAFT_03604 0.88 +0.2 113,650 - H281DRAFT_03604 0.88 +0.5 113,650 - H281DRAFT_03604 0.88 +0.2 113,650 - H281DRAFT_03604 0.88 -0.2 113,650 - H281DRAFT_03604 0.88 +0.9 113,717 + -0.2 113,718 - -1.0 113,718 - +0.8 113,718 - +0.3 113,718 - -0.0 113,774 - +0.5 113,935 + -0.5 113,936 - +0.7 113,984 + +0.3 113,985 - -2.6 113,985 - +0.5 114,013 + -1.0 114,042 + +1.2 114,043 - -0.7 114,043 - -0.4 114,043 - -0.8 114,043 - -0.4 114,043 - -1.0 114,058 - -0.2 114,088 + +1.4 114,165 + -0.3 114,166 - -0.8 114,192 + -0.2 114,193 - -0.1 114,250 + -0.3 114,293 + +0.6 114,369 + -0.1 114,370 - -1.3 114,395 + -0.9 114,396 - -0.4 114,396 - +0.4 114,396 - -0.7 114,396 - -0.1 114,495 - -0.1 114,495 - -0.4 114,571 + +1.0 114,571 + -0.0 114,572 - -1.7 114,572 - -0.4 114,685 + H281DRAFT_03605 0.25 -1.0 114,685 + H281DRAFT_03605 0.25 +0.3 114,685 + H281DRAFT_03605 0.25 -0.3 114,685 + H281DRAFT_03605 0.25 -1.4 114,718 + H281DRAFT_03605 0.34 -0.1 114,719 - H281DRAFT_03605 0.34 -0.5 114,779 - H281DRAFT_03605 0.51 -1.2 114,870 - H281DRAFT_03605 0.75 -0.1 114,924 - +0.1 114,943 + +0.3 114,944 - -2.6 114,952 + +0.1 114,952 + -0.3 114,952 + -0.6 114,952 + -0.3 114,952 + -0.0 114,952 + -0.8 114,952 + +0.2 114,952 + +0.8 114,952 + +0.1 114,953 - -0.5 114,953 - -0.2 114,953 - -0.4 114,953 - +0.5 114,953 - +0.3 114,953 - +0.8 115,068 + H281DRAFT_03606 0.18 -0.6 115,069 - H281DRAFT_03606 0.19 -0.3 115,136 - H281DRAFT_03606 0.29 -0.4 115,253 + H281DRAFT_03606 0.48 -0.5 115,254 - H281DRAFT_03606 0.48 -0.1 115,268 + H281DRAFT_03606 0.50 -0.4 115,584 + +0.8 115,677 + H281DRAFT_03607 0.11 +0.2 115,677 + H281DRAFT_03607 0.11 -0.1 115,678 - H281DRAFT_03607 0.11 -0.6 115,678 - H281DRAFT_03607 0.11 +0.2 115,678 - H281DRAFT_03607 0.11 +0.3 115,678 - H281DRAFT_03607 0.11 +0.0 115,678 - H281DRAFT_03607 0.11 -0.4 115,797 + H281DRAFT_03607 0.24 +0.3 115,797 + H281DRAFT_03607 0.24 -0.1 115,798 - H281DRAFT_03607 0.24 +0.4 115,831 + H281DRAFT_03607 0.27 +0.4 115,831 + H281DRAFT_03607 0.27 -0.2 115,831 + H281DRAFT_03607 0.27 -0.9 115,832 - H281DRAFT_03607 0.28 +0.6 115,832 - H281DRAFT_03607 0.28 +0.7 115,832 - H281DRAFT_03607 0.28 +0.4 115,879 + H281DRAFT_03607 0.33 +0.5 115,879 + H281DRAFT_03607 0.33 +0.4 115,879 + H281DRAFT_03607 0.33 -0.1 115,879 + H281DRAFT_03607 0.33 +0.5
Or see this region's nucleotide sequence