Experiment: Ethanol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_894 and HP15_895 are separated by 159 nucleotides HP15_895 and HP15_896 overlap by 1 nucleotides HP15_896 and HP15_897 are separated by 10 nucleotides
HP15_894: HP15_894 - conserved hypothetical protein, secreted, at 907,571 to 909,019
_894
HP15_895: HP15_895 - serine/threonine protein kinase, at 909,179 to 910,831
_895
HP15_896: HP15_896 - serine/threonine protein phosphatase, at 910,831 to 911,586
_896
HP15_897: HP15_897 - protein containing forkhead-associated domain, at 911,597 to 911,947
_897
Position (kb)
909
910
911 Strain fitness (log2 ratio)
-1
0
1
2 at 908.199 kb on - strand, within HP15_894 at 908.265 kb on + strand, within HP15_894 at 908.370 kb on - strand, within HP15_894 at 908.415 kb on + strand, within HP15_894 at 908.417 kb on - strand, within HP15_894 at 908.459 kb on - strand, within HP15_894 at 908.469 kb on - strand, within HP15_894 at 908.471 kb on + strand, within HP15_894 at 908.519 kb on - strand, within HP15_894 at 908.541 kb on + strand, within HP15_894 at 908.557 kb on - strand, within HP15_894 at 908.597 kb on + strand, within HP15_894 at 908.615 kb on + strand, within HP15_894 at 908.648 kb on - strand, within HP15_894 at 908.648 kb on - strand, within HP15_894 at 908.658 kb on - strand, within HP15_894 at 908.670 kb on - strand, within HP15_894 at 908.682 kb on - strand, within HP15_894 at 908.793 kb on - strand, within HP15_894 at 908.814 kb on - strand, within HP15_894 at 908.856 kb on - strand, within HP15_894 at 908.890 kb on + strand at 908.947 kb on + strand at 908.967 kb on - strand at 908.967 kb on - strand at 909.008 kb on + strand at 909.036 kb on + strand at 909.044 kb on - strand at 909.193 kb on + strand at 909.214 kb on - strand at 909.256 kb on - strand at 909.265 kb on - strand at 909.296 kb on - strand at 909.312 kb on - strand at 909.409 kb on - strand, within HP15_895 at 909.453 kb on + strand, within HP15_895 at 909.561 kb on + strand, within HP15_895 at 909.584 kb on + strand, within HP15_895 at 909.584 kb on + strand, within HP15_895 at 909.592 kb on - strand, within HP15_895 at 909.648 kb on + strand, within HP15_895 at 909.737 kb on + strand, within HP15_895 at 909.786 kb on - strand, within HP15_895 at 909.854 kb on - strand, within HP15_895 at 909.964 kb on + strand, within HP15_895 at 910.006 kb on + strand, within HP15_895 at 910.252 kb on - strand, within HP15_895 at 910.351 kb on + strand, within HP15_895 at 910.359 kb on - strand, within HP15_895 at 910.359 kb on - strand, within HP15_895 at 910.498 kb on + strand, within HP15_895 at 910.528 kb on + strand, within HP15_895 at 910.536 kb on - strand, within HP15_895 at 910.620 kb on + strand, within HP15_895 at 910.628 kb on - strand, within HP15_895 at 910.628 kb on - strand, within HP15_895 at 910.633 kb on - strand, within HP15_895 at 910.642 kb on - strand, within HP15_895 at 910.733 kb on - strand at 910.774 kb on + strand at 910.782 kb on - strand at 911.264 kb on + strand, within HP15_896 at 911.267 kb on - strand, within HP15_896 at 911.270 kb on - strand, within HP15_896 at 911.272 kb on + strand, within HP15_896 at 911.280 kb on - strand, within HP15_896 at 911.290 kb on - strand, within HP15_896 at 911.338 kb on + strand, within HP15_896 at 911.338 kb on + strand, within HP15_896 at 911.343 kb on + strand, within HP15_896 at 911.343 kb on + strand at 911.343 kb on + strand, within HP15_896 at 911.351 kb on - strand, within HP15_896 at 911.351 kb on - strand, within HP15_896 at 911.363 kb on - strand, within HP15_896 at 911.540 kb on - strand at 911.640 kb on + strand, within HP15_897 at 911.734 kb on + strand, within HP15_897
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol remove 908,199 - HP15_894 0.43 +1.3 908,265 + HP15_894 0.48 -0.5 908,370 - HP15_894 0.55 -1.2 908,415 + HP15_894 0.58 -0.1 908,417 - HP15_894 0.58 +0.3 908,459 - HP15_894 0.61 -0.2 908,469 - HP15_894 0.62 -0.9 908,471 + HP15_894 0.62 +0.1 908,519 - HP15_894 0.65 +0.7 908,541 + HP15_894 0.67 -1.5 908,557 - HP15_894 0.68 -0.4 908,597 + HP15_894 0.71 -0.7 908,615 + HP15_894 0.72 +0.7 908,648 - HP15_894 0.74 +0.3 908,648 - HP15_894 0.74 -0.8 908,658 - HP15_894 0.75 +0.7 908,670 - HP15_894 0.76 -0.1 908,682 - HP15_894 0.77 -0.3 908,793 - HP15_894 0.84 -0.4 908,814 - HP15_894 0.86 +0.1 908,856 - HP15_894 0.89 +0.6 908,890 + -0.5 908,947 + +0.1 908,967 - +0.7 908,967 - -1.3 909,008 + -0.7 909,036 + +0.4 909,044 - +0.6 909,193 + -0.5 909,214 - +0.4 909,256 - +1.1 909,265 - +0.4 909,296 - -0.3 909,312 - -0.5 909,409 - HP15_895 0.14 -0.7 909,453 + HP15_895 0.17 -1.3 909,561 + HP15_895 0.23 -1.0 909,584 + HP15_895 0.25 -1.3 909,584 + HP15_895 0.25 +0.7 909,592 - HP15_895 0.25 -0.3 909,648 + HP15_895 0.28 -1.3 909,737 + HP15_895 0.34 -0.2 909,786 - HP15_895 0.37 -0.1 909,854 - HP15_895 0.41 -1.4 909,964 + HP15_895 0.47 -0.1 910,006 + HP15_895 0.50 +0.7 910,252 - HP15_895 0.65 +0.0 910,351 + HP15_895 0.71 -1.5 910,359 - HP15_895 0.71 -0.3 910,359 - HP15_895 0.71 -0.7 910,498 + HP15_895 0.80 +0.6 910,528 + HP15_895 0.82 -0.1 910,536 - HP15_895 0.82 -1.0 910,620 + HP15_895 0.87 -0.8 910,628 - HP15_895 0.88 -0.4 910,628 - HP15_895 0.88 -0.6 910,633 - HP15_895 0.88 -0.5 910,642 - HP15_895 0.89 -0.9 910,733 - +1.6 910,774 + +0.7 910,782 - +0.2 911,264 + HP15_896 0.57 +0.2 911,267 - HP15_896 0.58 -0.5 911,270 - HP15_896 0.58 +0.9 911,272 + HP15_896 0.58 +0.3 911,280 - HP15_896 0.59 -0.3 911,290 - HP15_896 0.61 -0.3 911,338 + HP15_896 0.67 +0.1 911,338 + HP15_896 0.67 +0.3 911,343 + HP15_896 0.68 +0.3 911,343 + +0.7 911,343 + HP15_896 0.68 -0.1 911,351 - HP15_896 0.69 -0.0 911,351 - HP15_896 0.69 -0.1 911,363 - HP15_896 0.70 +1.8 911,540 - +0.2 911,640 + HP15_897 0.12 -0.1 911,734 + HP15_897 0.39 -0.1
Or see this region's nucleotide sequence