Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27440

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27430 and BWI76_RS27435 are separated by 4 nucleotidesBWI76_RS27435 and BWI76_RS27440 are separated by 2 nucleotidesBWI76_RS27440 and BWI76_RS27445 are separated by 53 nucleotides BWI76_RS27430: BWI76_RS27430 - (p)ppGpp synthetase, at 5,689,947 to 5,692,067 _RS27430 BWI76_RS27435: BWI76_RS27435 - tRNA (guanosine(18)-2'-O)-methyltransferase TrmH, at 5,692,072 to 5,692,761 _RS27435 BWI76_RS27440: BWI76_RS27440 - DNA helicase RecG, at 5,692,764 to 5,694,845 _RS27440 BWI76_RS27445: BWI76_RS27445 - fructose-bisphosphatase class II, at 5,694,899 to 5,695,909 _RS27445 Position (kb) 5692 5693 5694 5695Strain fitness (log2 ratio) -3 -2 -1 0 1at 5691.896 kb on + strandat 5692.004 kb on - strandat 5692.139 kb on + strandat 5692.287 kb on + strand, within BWI76_RS27435at 5692.295 kb on - strand, within BWI76_RS27435at 5692.295 kb on - strand, within BWI76_RS27435at 5692.333 kb on + strand, within BWI76_RS27435at 5692.333 kb on + strand, within BWI76_RS27435at 5692.420 kb on - strand, within BWI76_RS27435at 5692.471 kb on + strand, within BWI76_RS27435at 5692.545 kb on + strand, within BWI76_RS27435at 5692.553 kb on - strand, within BWI76_RS27435at 5692.605 kb on + strand, within BWI76_RS27435at 5692.678 kb on + strand, within BWI76_RS27435at 5692.868 kb on - strandat 5693.250 kb on - strand, within BWI76_RS27440at 5693.383 kb on + strand, within BWI76_RS27440at 5693.391 kb on - strand, within BWI76_RS27440at 5693.506 kb on + strand, within BWI76_RS27440at 5693.797 kb on + strand, within BWI76_RS27440at 5694.031 kb on + strand, within BWI76_RS27440at 5694.301 kb on - strand, within BWI76_RS27440at 5694.338 kb on - strand, within BWI76_RS27440at 5694.430 kb on + strand, within BWI76_RS27440at 5695.104 kb on - strand, within BWI76_RS27445at 5695.475 kb on + strand, within BWI76_RS27445at 5695.553 kb on + strand, within BWI76_RS27445at 5695.771 kb on + strand, within BWI76_RS27445

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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5,691,896 + -0.0
5,692,004 - -0.2
5,692,139 + +0.1
5,692,287 + BWI76_RS27435 0.31 -0.9
5,692,295 - BWI76_RS27435 0.32 -1.0
5,692,295 - BWI76_RS27435 0.32 -0.8
5,692,333 + BWI76_RS27435 0.38 -0.1
5,692,333 + BWI76_RS27435 0.38 -0.1
5,692,420 - BWI76_RS27435 0.50 -0.7
5,692,471 + BWI76_RS27435 0.58 -0.2
5,692,545 + BWI76_RS27435 0.69 -0.6
5,692,553 - BWI76_RS27435 0.70 -0.9
5,692,605 + BWI76_RS27435 0.77 +0.6
5,692,678 + BWI76_RS27435 0.88 -1.8
5,692,868 - +0.2
5,693,250 - BWI76_RS27440 0.23 -2.0
5,693,383 + BWI76_RS27440 0.30 -1.7
5,693,391 - BWI76_RS27440 0.30 +1.0
5,693,506 + BWI76_RS27440 0.36 -0.7
5,693,797 + BWI76_RS27440 0.50 -1.4
5,694,031 + BWI76_RS27440 0.61 -0.4
5,694,301 - BWI76_RS27440 0.74 -2.9
5,694,338 - BWI76_RS27440 0.76 +0.6
5,694,430 + BWI76_RS27440 0.80 -1.9
5,695,104 - BWI76_RS27445 0.20 -0.6
5,695,475 + BWI76_RS27445 0.57 +0.1
5,695,553 + BWI76_RS27445 0.65 -0.2
5,695,771 + BWI76_RS27445 0.86 -0.3

Or see this region's nucleotide sequence