Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27430 and BWI76_RS27435 are separated by 4 nucleotides BWI76_RS27435 and BWI76_RS27440 are separated by 2 nucleotides BWI76_RS27440 and BWI76_RS27445 are separated by 53 nucleotides
BWI76_RS27430: BWI76_RS27430 - (p)ppGpp synthetase, at 5,689,947 to 5,692,067
_RS27430
BWI76_RS27435: BWI76_RS27435 - tRNA (guanosine(18)-2'-O)-methyltransferase TrmH, at 5,692,072 to 5,692,761
_RS27435
BWI76_RS27440: BWI76_RS27440 - DNA helicase RecG, at 5,692,764 to 5,694,845
_RS27440
BWI76_RS27445: BWI76_RS27445 - fructose-bisphosphatase class II, at 5,694,899 to 5,695,909
_RS27445
Position (kb)
5692
5693
5694
5695 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5691.896 kb on + strand at 5692.004 kb on - strand at 5692.139 kb on + strand at 5692.287 kb on + strand, within BWI76_RS27435 at 5692.295 kb on - strand, within BWI76_RS27435 at 5692.295 kb on - strand, within BWI76_RS27435 at 5692.333 kb on + strand, within BWI76_RS27435 at 5692.333 kb on + strand, within BWI76_RS27435 at 5692.420 kb on - strand, within BWI76_RS27435 at 5692.471 kb on + strand, within BWI76_RS27435 at 5692.545 kb on + strand, within BWI76_RS27435 at 5692.553 kb on - strand, within BWI76_RS27435 at 5692.605 kb on + strand, within BWI76_RS27435 at 5692.678 kb on + strand, within BWI76_RS27435 at 5692.868 kb on - strand at 5693.250 kb on - strand, within BWI76_RS27440 at 5693.383 kb on + strand, within BWI76_RS27440 at 5693.391 kb on - strand, within BWI76_RS27440 at 5693.506 kb on + strand, within BWI76_RS27440 at 5693.797 kb on + strand, within BWI76_RS27440 at 5694.031 kb on + strand, within BWI76_RS27440 at 5694.301 kb on - strand, within BWI76_RS27440 at 5694.338 kb on - strand, within BWI76_RS27440 at 5694.430 kb on + strand, within BWI76_RS27440 at 5695.104 kb on - strand, within BWI76_RS27445 at 5695.475 kb on + strand, within BWI76_RS27445 at 5695.553 kb on + strand, within BWI76_RS27445 at 5695.771 kb on + strand, within BWI76_RS27445
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 5,691,896 + -0.0 5,692,004 - -0.2 5,692,139 + +0.1 5,692,287 + BWI76_RS27435 0.31 -0.9 5,692,295 - BWI76_RS27435 0.32 -1.0 5,692,295 - BWI76_RS27435 0.32 -0.8 5,692,333 + BWI76_RS27435 0.38 -0.1 5,692,333 + BWI76_RS27435 0.38 -0.1 5,692,420 - BWI76_RS27435 0.50 -0.7 5,692,471 + BWI76_RS27435 0.58 -0.2 5,692,545 + BWI76_RS27435 0.69 -0.6 5,692,553 - BWI76_RS27435 0.70 -0.9 5,692,605 + BWI76_RS27435 0.77 +0.6 5,692,678 + BWI76_RS27435 0.88 -1.8 5,692,868 - +0.2 5,693,250 - BWI76_RS27440 0.23 -2.0 5,693,383 + BWI76_RS27440 0.30 -1.7 5,693,391 - BWI76_RS27440 0.30 +1.0 5,693,506 + BWI76_RS27440 0.36 -0.7 5,693,797 + BWI76_RS27440 0.50 -1.4 5,694,031 + BWI76_RS27440 0.61 -0.4 5,694,301 - BWI76_RS27440 0.74 -2.9 5,694,338 - BWI76_RS27440 0.76 +0.6 5,694,430 + BWI76_RS27440 0.80 -1.9 5,695,104 - BWI76_RS27445 0.20 -0.6 5,695,475 + BWI76_RS27445 0.57 +0.1 5,695,553 + BWI76_RS27445 0.65 -0.2 5,695,771 + BWI76_RS27445 0.86 -0.3
Or see this region's nucleotide sequence