Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24380 and BWI76_RS24385 overlap by 1 nucleotides BWI76_RS24385 and BWI76_RS24390 are separated by 24 nucleotides BWI76_RS24390 and BWI76_RS24395 overlap by 4 nucleotides BWI76_RS24395 and BWI76_RS24400 are separated by 195 nucleotides
BWI76_RS24380: BWI76_RS24380 - esterase YqiA, at 5,082,853 to 5,083,428
_RS24380
BWI76_RS24385: BWI76_RS24385 - phosphodiesterase, at 5,083,428 to 5,084,255
_RS24385
BWI76_RS24390: BWI76_RS24390 - hypothetical protein, at 5,084,280 to 5,084,702
_RS24390
BWI76_RS24395: BWI76_RS24395 - ADP-ribose diphosphatase, at 5,084,699 to 5,085,331
_RS24395
BWI76_RS24400: BWI76_RS24400 - outer membrane channel protein TolC, at 5,085,527 to 5,086,975
_RS24400
Position (kb)
5084
5085 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5083.298 kb on + strand, within BWI76_RS24380 at 5083.306 kb on - strand at 5083.340 kb on - strand, within BWI76_RS24380 at 5083.427 kb on - strand at 5083.522 kb on - strand, within BWI76_RS24385 at 5083.556 kb on + strand, within BWI76_RS24385 at 5083.578 kb on - strand, within BWI76_RS24385 at 5083.578 kb on - strand, within BWI76_RS24385 at 5083.578 kb on - strand, within BWI76_RS24385 at 5083.658 kb on + strand, within BWI76_RS24385 at 5083.726 kb on - strand, within BWI76_RS24385 at 5083.778 kb on + strand, within BWI76_RS24385 at 5083.849 kb on - strand at 5083.945 kb on + strand, within BWI76_RS24385 at 5084.023 kb on + strand, within BWI76_RS24385 at 5084.183 kb on + strand at 5084.434 kb on - strand, within BWI76_RS24390 at 5084.593 kb on - strand, within BWI76_RS24390 at 5084.767 kb on - strand, within BWI76_RS24395 at 5084.799 kb on + strand, within BWI76_RS24395 at 5084.807 kb on - strand, within BWI76_RS24395 at 5084.953 kb on - strand, within BWI76_RS24395 at 5084.963 kb on - strand at 5084.963 kb on - strand, within BWI76_RS24395 at 5084.971 kb on + strand, within BWI76_RS24395 at 5085.101 kb on - strand, within BWI76_RS24395 at 5085.142 kb on - strand, within BWI76_RS24395 at 5085.195 kb on - strand, within BWI76_RS24395 at 5085.220 kb on + strand, within BWI76_RS24395 at 5085.309 kb on - strand at 5085.316 kb on + strand at 5085.337 kb on - strand at 5085.349 kb on - strand at 5085.462 kb on + strand at 5085.497 kb on + strand at 5085.505 kb on - strand at 5085.555 kb on + strand at 5085.555 kb on + strand at 5085.555 kb on + strand at 5085.563 kb on - strand at 5085.563 kb on - strand at 5085.563 kb on - strand at 5085.563 kb on - strand at 5085.567 kb on - strand at 5085.590 kb on + strand at 5085.633 kb on + strand at 5085.633 kb on + strand at 5085.633 kb on + strand at 5085.641 kb on - strand at 5085.682 kb on + strand, within BWI76_RS24400
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 5,083,298 + BWI76_RS24380 0.77 +0.5 5,083,306 - +2.0 5,083,340 - BWI76_RS24380 0.85 +1.0 5,083,427 - -1.2 5,083,522 - BWI76_RS24385 0.11 +0.6 5,083,556 + BWI76_RS24385 0.15 +1.3 5,083,578 - BWI76_RS24385 0.18 -0.1 5,083,578 - BWI76_RS24385 0.18 +0.4 5,083,578 - BWI76_RS24385 0.18 -0.3 5,083,658 + BWI76_RS24385 0.28 +0.3 5,083,726 - BWI76_RS24385 0.36 +0.1 5,083,778 + BWI76_RS24385 0.42 -0.5 5,083,849 - -0.0 5,083,945 + BWI76_RS24385 0.62 +0.7 5,084,023 + BWI76_RS24385 0.72 -0.0 5,084,183 + +1.2 5,084,434 - BWI76_RS24390 0.36 -0.3 5,084,593 - BWI76_RS24390 0.74 +1.3 5,084,767 - BWI76_RS24395 0.11 -0.5 5,084,799 + BWI76_RS24395 0.16 +1.1 5,084,807 - BWI76_RS24395 0.17 +0.1 5,084,953 - BWI76_RS24395 0.40 -0.1 5,084,963 - +2.0 5,084,963 - BWI76_RS24395 0.42 +0.1 5,084,971 + BWI76_RS24395 0.43 -0.2 5,085,101 - BWI76_RS24395 0.64 +0.7 5,085,142 - BWI76_RS24395 0.70 +1.1 5,085,195 - BWI76_RS24395 0.78 +0.2 5,085,220 + BWI76_RS24395 0.82 +0.8 5,085,309 - -0.2 5,085,316 + -0.2 5,085,337 - +1.4 5,085,349 - -0.4 5,085,462 + -0.5 5,085,497 + +1.3 5,085,505 - +0.1 5,085,555 + -0.7 5,085,555 + +0.2 5,085,555 + -0.9 5,085,563 - -2.3 5,085,563 - -0.6 5,085,563 - -0.8 5,085,563 - -0.7 5,085,567 - -0.8 5,085,590 + -0.0 5,085,633 + -0.5 5,085,633 + +0.0 5,085,633 + -1.0 5,085,641 - -1.5 5,085,682 + BWI76_RS24400 0.11 +0.4
Or see this region's nucleotide sequence