Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23360 and BWI76_RS23365 are separated by 135 nucleotides BWI76_RS23365 and BWI76_RS23370 overlap by 14 nucleotides BWI76_RS23370 and BWI76_RS23375 are separated by 135 nucleotides
BWI76_RS23360: BWI76_RS23360 - diaminopimelate decarboxylase, at 4,871,339 to 4,872,601
_RS23360
BWI76_RS23365: BWI76_RS23365 - LysR family transcriptional regulator, at 4,872,737 to 4,873,663
_RS23365
BWI76_RS23370: BWI76_RS23370 - aspartate/glutamate racemase, at 4,873,650 to 4,874,342
_RS23370
BWI76_RS23375: BWI76_RS23375 - cupin, at 4,874,478 to 4,874,804
_RS23375
Position (kb)
4872
4873
4874 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4872.158 kb on + strand, within BWI76_RS23360 at 4872.261 kb on + strand, within BWI76_RS23360 at 4872.261 kb on + strand, within BWI76_RS23360 at 4872.295 kb on + strand, within BWI76_RS23360 at 4872.507 kb on + strand at 4873.349 kb on - strand, within BWI76_RS23365 at 4873.500 kb on + strand at 4873.500 kb on + strand, within BWI76_RS23365 at 4873.508 kb on - strand, within BWI76_RS23365 at 4873.534 kb on - strand, within BWI76_RS23365 at 4873.604 kb on + strand at 4873.648 kb on + strand at 4873.802 kb on + strand, within BWI76_RS23370 at 4873.810 kb on - strand, within BWI76_RS23370 at 4873.822 kb on - strand, within BWI76_RS23370 at 4873.823 kb on + strand, within BWI76_RS23370 at 4873.920 kb on + strand, within BWI76_RS23370 at 4873.997 kb on - strand, within BWI76_RS23370 at 4874.110 kb on - strand, within BWI76_RS23370 at 4874.134 kb on - strand, within BWI76_RS23370 at 4874.156 kb on - strand, within BWI76_RS23370 at 4874.311 kb on - strand at 4874.519 kb on - strand, within BWI76_RS23375 at 4874.519 kb on - strand, within BWI76_RS23375 at 4874.578 kb on + strand, within BWI76_RS23375 at 4874.627 kb on + strand, within BWI76_RS23375 at 4874.627 kb on + strand, within BWI76_RS23375 at 4874.632 kb on + strand, within BWI76_RS23375 at 4874.632 kb on + strand, within BWI76_RS23375 at 4874.640 kb on - strand, within BWI76_RS23375
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,872,158 + BWI76_RS23360 0.65 -2.8 4,872,261 + BWI76_RS23360 0.73 -4.2 4,872,261 + BWI76_RS23360 0.73 -2.4 4,872,295 + BWI76_RS23360 0.76 -2.2 4,872,507 + -2.5 4,873,349 - BWI76_RS23365 0.66 -1.1 4,873,500 + -0.9 4,873,500 + BWI76_RS23365 0.82 -4.0 4,873,508 - BWI76_RS23365 0.83 -4.3 4,873,534 - BWI76_RS23365 0.86 +0.9 4,873,604 + -2.4 4,873,648 + +0.9 4,873,802 + BWI76_RS23370 0.22 +0.3 4,873,810 - BWI76_RS23370 0.23 +0.0 4,873,822 - BWI76_RS23370 0.25 -1.2 4,873,823 + BWI76_RS23370 0.25 +1.6 4,873,920 + BWI76_RS23370 0.39 +1.1 4,873,997 - BWI76_RS23370 0.50 +0.2 4,874,110 - BWI76_RS23370 0.66 +0.1 4,874,134 - BWI76_RS23370 0.70 -1.5 4,874,156 - BWI76_RS23370 0.73 -0.5 4,874,311 - -0.0 4,874,519 - BWI76_RS23375 0.13 +0.1 4,874,519 - BWI76_RS23375 0.13 +0.1 4,874,578 + BWI76_RS23375 0.31 -0.7 4,874,627 + BWI76_RS23375 0.46 -0.7 4,874,627 + BWI76_RS23375 0.46 -0.2 4,874,632 + BWI76_RS23375 0.47 -0.8 4,874,632 + BWI76_RS23375 0.47 -0.0 4,874,640 - BWI76_RS23375 0.50 +0.8
Or see this region's nucleotide sequence