Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22700

Experiment: L-Glutamic (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS22695 and BWI76_RS22700 are separated by 9 nucleotidesBWI76_RS22700 and BWI76_RS22705 are separated by 9 nucleotides BWI76_RS22695: BWI76_RS22695 - sulfate adenylyltransferase, at 4,727,554 to 4,728,981 _RS22695 BWI76_RS22700: BWI76_RS22700 - sulfate adenylyltransferase subunit 2, at 4,728,991 to 4,729,899 _RS22700 BWI76_RS22705: BWI76_RS22705 - siroheme synthase, at 4,729,909 to 4,731,324 _RS22705 Position (kb) 4728 4729 4730Strain fitness (log2 ratio) -2 -1 0 1at 4728.156 kb on + strandat 4728.156 kb on + strand, within BWI76_RS22695at 4728.164 kb on - strand, within BWI76_RS22695at 4728.164 kb on - strand, within BWI76_RS22695at 4728.413 kb on - strand, within BWI76_RS22695at 4728.620 kb on - strand, within BWI76_RS22695at 4728.766 kb on - strand, within BWI76_RS22695at 4728.979 kb on - strandat 4728.984 kb on - strandat 4729.054 kb on + strandat 4729.246 kb on + strand, within BWI76_RS22700at 4729.401 kb on + strand, within BWI76_RS22700at 4729.678 kb on + strand, within BWI76_RS22700at 4729.770 kb on + strand, within BWI76_RS22700at 4729.811 kb on + strandat 4729.894 kb on + strandat 4730.052 kb on + strand, within BWI76_RS22705at 4730.060 kb on + strand, within BWI76_RS22705at 4730.060 kb on - strand, within BWI76_RS22705at 4730.163 kb on - strand, within BWI76_RS22705at 4730.166 kb on + strand, within BWI76_RS22705at 4730.202 kb on - strand, within BWI76_RS22705at 4730.277 kb on + strand, within BWI76_RS22705at 4730.454 kb on + strand, within BWI76_RS22705at 4730.523 kb on - strand, within BWI76_RS22705at 4730.565 kb on + strand, within BWI76_RS22705at 4730.573 kb on - strand, within BWI76_RS22705at 4730.663 kb on - strand, within BWI76_RS22705at 4730.663 kb on - strand, within BWI76_RS22705at 4730.735 kb on + strand, within BWI76_RS22705at 4730.787 kb on + strand, within BWI76_RS22705at 4730.832 kb on - strand, within BWI76_RS22705

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
remove
4,728,156 + +0.1
4,728,156 + BWI76_RS22695 0.42 -0.2
4,728,164 - BWI76_RS22695 0.43 -0.3
4,728,164 - BWI76_RS22695 0.43 -1.5
4,728,413 - BWI76_RS22695 0.60 +0.7
4,728,620 - BWI76_RS22695 0.75 +0.2
4,728,766 - BWI76_RS22695 0.85 -0.7
4,728,979 - -1.4
4,728,984 - -1.7
4,729,054 + -1.3
4,729,246 + BWI76_RS22700 0.28 -1.2
4,729,401 + BWI76_RS22700 0.45 -1.8
4,729,678 + BWI76_RS22700 0.76 -0.8
4,729,770 + BWI76_RS22700 0.86 -0.1
4,729,811 + -1.1
4,729,894 + -0.6
4,730,052 + BWI76_RS22705 0.10 -0.1
4,730,060 + BWI76_RS22705 0.11 -1.0
4,730,060 - BWI76_RS22705 0.11 +0.0
4,730,163 - BWI76_RS22705 0.18 +0.4
4,730,166 + BWI76_RS22705 0.18 -1.3
4,730,202 - BWI76_RS22705 0.21 -0.6
4,730,277 + BWI76_RS22705 0.26 -0.5
4,730,454 + BWI76_RS22705 0.38 -0.8
4,730,523 - BWI76_RS22705 0.43 -0.2
4,730,565 + BWI76_RS22705 0.46 -1.7
4,730,573 - BWI76_RS22705 0.47 -0.1
4,730,663 - BWI76_RS22705 0.53 -1.9
4,730,663 - BWI76_RS22705 0.53 +0.2
4,730,735 + BWI76_RS22705 0.58 +0.0
4,730,787 + BWI76_RS22705 0.62 -1.1
4,730,832 - BWI76_RS22705 0.65 -0.9

Or see this region's nucleotide sequence