Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21475

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21465 and BWI76_RS21470 overlap by 4 nucleotidesBWI76_RS21470 and BWI76_RS21475 are separated by 68 nucleotidesBWI76_RS21475 and BWI76_RS21480 are separated by 9 nucleotides BWI76_RS21465: BWI76_RS21465 - bifunctional chorismate mutase/prephenate dehydratase, at 4,496,591 to 4,497,751 _RS21465 BWI76_RS21470: BWI76_RS21470 - gluconolaconase, at 4,497,748 to 4,498,620 _RS21470 BWI76_RS21475: BWI76_RS21475 - bifunctional chorismate mutase/prephenate dehydrogenase, at 4,498,689 to 4,499,810 _RS21475 BWI76_RS21480: BWI76_RS21480 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 4,499,820 to 4,500,890 _RS21480 Position (kb) 4498 4499 4500Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 4497.709 kb on - strandat 4497.709 kb on - strandat 4497.888 kb on - strand, within BWI76_RS21470at 4498.016 kb on + strand, within BWI76_RS21470at 4498.440 kb on + strand, within BWI76_RS21470at 4498.521 kb on + strand, within BWI76_RS21470at 4498.563 kb on + strandat 4498.730 kb on - strandat 4498.908 kb on - strand, within BWI76_RS21475at 4499.099 kb on - strand, within BWI76_RS21475at 4499.118 kb on - strand, within BWI76_RS21475at 4499.220 kb on + strand, within BWI76_RS21475at 4499.591 kb on - strand, within BWI76_RS21475at 4499.687 kb on + strand, within BWI76_RS21475at 4499.758 kb on + strandat 4499.958 kb on + strand, within BWI76_RS21480at 4499.968 kb on - strand, within BWI76_RS21480at 4500.016 kb on + strand, within BWI76_RS21480at 4500.016 kb on + strand, within BWI76_RS21480at 4500.024 kb on - strand, within BWI76_RS21480at 4500.221 kb on - strand, within BWI76_RS21480at 4500.384 kb on - strand, within BWI76_RS21480at 4500.440 kb on - strand, within BWI76_RS21480at 4500.481 kb on + strand, within BWI76_RS21480at 4500.584 kb on + strand, within BWI76_RS21480at 4500.623 kb on + strand, within BWI76_RS21480at 4500.631 kb on - strand, within BWI76_RS21480at 4500.634 kb on + strand, within BWI76_RS21480at 4500.641 kb on + strand, within BWI76_RS21480

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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4,497,709 - -2.0
4,497,709 - -2.5
4,497,888 - BWI76_RS21470 0.16 -2.0
4,498,016 + BWI76_RS21470 0.31 -0.1
4,498,440 + BWI76_RS21470 0.79 -0.3
4,498,521 + BWI76_RS21470 0.89 +1.1
4,498,563 + +1.2
4,498,730 - -0.6
4,498,908 - BWI76_RS21475 0.20 -5.9
4,499,099 - BWI76_RS21475 0.37 -3.3
4,499,118 - BWI76_RS21475 0.38 -5.1
4,499,220 + BWI76_RS21475 0.47 -4.4
4,499,591 - BWI76_RS21475 0.80 -4.3
4,499,687 + BWI76_RS21475 0.89 -3.5
4,499,758 + -1.8
4,499,958 + BWI76_RS21480 0.13 -4.3
4,499,968 - BWI76_RS21480 0.14 -0.3
4,500,016 + BWI76_RS21480 0.18 -2.4
4,500,016 + BWI76_RS21480 0.18 -2.5
4,500,024 - BWI76_RS21480 0.19 -1.8
4,500,221 - BWI76_RS21480 0.37 -1.1
4,500,384 - BWI76_RS21480 0.53 -1.5
4,500,440 - BWI76_RS21480 0.58 -0.8
4,500,481 + BWI76_RS21480 0.62 -3.3
4,500,584 + BWI76_RS21480 0.71 -1.7
4,500,623 + BWI76_RS21480 0.75 -2.2
4,500,631 - BWI76_RS21480 0.76 -1.9
4,500,634 + BWI76_RS21480 0.76 -3.2
4,500,641 + BWI76_RS21480 0.77 -3.2

Or see this region's nucleotide sequence