Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21360 and BWI76_RS21365 overlap by 16 nucleotides BWI76_RS21365 and BWI76_RS21370 are separated by 132 nucleotides BWI76_RS21370 and BWI76_RS21375 are separated by 44 nucleotides BWI76_RS21375 and BWI76_RS21380 are separated by 311 nucleotides
BWI76_RS21360: BWI76_RS21360 - L-aspartate oxidase, at 4,471,092 to 4,472,711
_RS21360
BWI76_RS21365: BWI76_RS21365 - tRNA (adenosine(37)-N6)-methyltransferase TrmM, at 4,472,696 to 4,473,436
_RS21365
BWI76_RS21370: BWI76_RS21370 - ATP-dependent RNA helicase SrmB, at 4,473,569 to 4,474,900
_RS21370
BWI76_RS21375: BWI76_RS21375 - autonomous glycyl radical cofactor GrcA, at 4,474,945 to 4,475,328
_RS21375
BWI76_RS21380: BWI76_RS21380 - uracil-DNA glycosylase, at 4,475,640 to 4,476,329
_RS21380
Position (kb) 4473
4474
4475 Strain fitness (log2 ratio) -2
-1
0
1 at 4472.578 kb on + strand at 4472.625 kb on + strand at 4472.647 kb on + strand at 4472.655 kb on - strand at 4472.760 kb on - strand at 4473.262 kb on - strand, within BWI76_RS21365 at 4473.297 kb on + strand, within BWI76_RS21365 at 4473.297 kb on + strand, within BWI76_RS21365 at 4473.297 kb on + strand, within BWI76_RS21365 at 4473.305 kb on - strand, within BWI76_RS21365 at 4473.395 kb on + strand at 4473.469 kb on + strand at 4473.476 kb on + strand at 4473.477 kb on - strand at 4473.804 kb on + strand, within BWI76_RS21370 at 4473.812 kb on - strand, within BWI76_RS21370 at 4475.120 kb on - strand, within BWI76_RS21375 at 4475.276 kb on - strand, within BWI76_RS21375 at 4475.409 kb on - strand at 4475.499 kb on + strand at 4475.796 kb on - strand, within BWI76_RS21380 at 4475.819 kb on - strand, within BWI76_RS21380
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,472,578 + -0.2 4,472,625 + -2.7 4,472,647 + +0.5 4,472,655 - -0.0 4,472,760 - -0.1 4,473,262 - BWI76_RS21365 0.76 +0.3 4,473,297 + BWI76_RS21365 0.81 -0.8 4,473,297 + BWI76_RS21365 0.81 +0.3 4,473,297 + BWI76_RS21365 0.81 -0.2 4,473,305 - BWI76_RS21365 0.82 +0.2 4,473,395 + +0.6 4,473,469 + -0.9 4,473,476 + -0.2 4,473,477 - -0.1 4,473,804 + BWI76_RS21370 0.18 -1.9 4,473,812 - BWI76_RS21370 0.18 +0.1 4,475,120 - BWI76_RS21375 0.46 +1.6 4,475,276 - BWI76_RS21375 0.86 -0.5 4,475,409 - +0.1 4,475,499 + +0.9 4,475,796 - BWI76_RS21380 0.23 +0.3 4,475,819 - BWI76_RS21380 0.26 +0.4
Or see this region's nucleotide sequence