Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21260 and BWI76_RS21265 are separated by 545 nucleotides BWI76_RS21265 and BWI76_RS21270 are separated by 53 nucleotides BWI76_RS21270 and BWI76_RS21275 overlap by 11 nucleotides
BWI76_RS21260: BWI76_RS21260 - two-component sensor histidine kinase, at 4,450,929 to 4,452,383
_RS21260
BWI76_RS21265: BWI76_RS21265 - phosphoribosylformylglycinamidine synthase, at 4,452,929 to 4,456,816
_RS21265
BWI76_RS21270: BWI76_RS21270 - phosphoribosylformyl-glycineamide synthetase, at 4,456,870 to 4,457,001
_RS21270
BWI76_RS21275: BWI76_RS21275 - lytic transglycosylase F, at 4,456,991 to 4,458,607
_RS21275
Position (kb) 4452
4453
4454
4455
4456
4457 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 4451.953 kb on - strand, within BWI76_RS21260 at 4452.104 kb on + strand, within BWI76_RS21260 at 4452.111 kb on - strand, within BWI76_RS21260 at 4452.156 kb on - strand, within BWI76_RS21260 at 4452.251 kb on + strand at 4452.528 kb on + strand at 4452.940 kb on + strand at 4453.142 kb on + strand at 4453.387 kb on + strand, within BWI76_RS21265 at 4453.395 kb on - strand, within BWI76_RS21265 at 4453.395 kb on - strand, within BWI76_RS21265 at 4453.728 kb on + strand, within BWI76_RS21265 at 4453.757 kb on - strand, within BWI76_RS21265 at 4453.881 kb on + strand, within BWI76_RS21265 at 4454.057 kb on - strand, within BWI76_RS21265 at 4454.057 kb on - strand, within BWI76_RS21265 at 4454.073 kb on + strand, within BWI76_RS21265 at 4454.081 kb on + strand, within BWI76_RS21265 at 4454.282 kb on - strand, within BWI76_RS21265 at 4454.363 kb on - strand, within BWI76_RS21265 at 4454.389 kb on - strand, within BWI76_RS21265 at 4454.454 kb on - strand, within BWI76_RS21265 at 4454.518 kb on - strand, within BWI76_RS21265 at 4454.535 kb on - strand, within BWI76_RS21265 at 4454.618 kb on - strand, within BWI76_RS21265 at 4454.654 kb on + strand, within BWI76_RS21265 at 4454.657 kb on - strand, within BWI76_RS21265 at 4454.737 kb on - strand, within BWI76_RS21265 at 4454.795 kb on - strand, within BWI76_RS21265 at 4455.393 kb on + strand, within BWI76_RS21265 at 4455.429 kb on + strand, within BWI76_RS21265 at 4455.934 kb on - strand, within BWI76_RS21265 at 4455.995 kb on - strand, within BWI76_RS21265 at 4456.010 kb on + strand, within BWI76_RS21265 at 4456.176 kb on + strand, within BWI76_RS21265 at 4456.509 kb on + strand at 4456.517 kb on - strand at 4456.534 kb on - strand at 4456.609 kb on + strand at 4456.609 kb on + strand at 4456.737 kb on - strand at 4456.875 kb on - strand at 4457.009 kb on - strand at 4457.480 kb on + strand, within BWI76_RS21275 at 4457.524 kb on + strand, within BWI76_RS21275 at 4457.617 kb on - strand, within BWI76_RS21275 at 4457.684 kb on + strand, within BWI76_RS21275 at 4457.738 kb on - strand, within BWI76_RS21275
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,451,953 - BWI76_RS21260 0.70 +0.5 4,452,104 + BWI76_RS21260 0.81 -1.0 4,452,111 - BWI76_RS21260 0.81 +0.0 4,452,156 - BWI76_RS21260 0.84 -0.0 4,452,251 + -1.1 4,452,528 + -0.2 4,452,940 + -2.4 4,453,142 + -4.9 4,453,387 + BWI76_RS21265 0.12 -3.4 4,453,395 - BWI76_RS21265 0.12 -3.9 4,453,395 - BWI76_RS21265 0.12 -4.3 4,453,728 + BWI76_RS21265 0.21 -5.2 4,453,757 - BWI76_RS21265 0.21 -5.0 4,453,881 + BWI76_RS21265 0.24 -3.7 4,454,057 - BWI76_RS21265 0.29 -4.1 4,454,057 - BWI76_RS21265 0.29 -4.5 4,454,073 + BWI76_RS21265 0.29 -2.1 4,454,081 + BWI76_RS21265 0.30 -3.8 4,454,282 - BWI76_RS21265 0.35 -3.5 4,454,363 - BWI76_RS21265 0.37 -4.6 4,454,389 - BWI76_RS21265 0.38 -3.2 4,454,454 - BWI76_RS21265 0.39 -3.7 4,454,518 - BWI76_RS21265 0.41 -5.9 4,454,535 - BWI76_RS21265 0.41 -2.0 4,454,618 - BWI76_RS21265 0.43 -0.3 4,454,654 + BWI76_RS21265 0.44 -3.2 4,454,657 - BWI76_RS21265 0.44 -6.0 4,454,737 - BWI76_RS21265 0.47 -4.4 4,454,795 - BWI76_RS21265 0.48 -4.8 4,455,393 + BWI76_RS21265 0.63 -3.6 4,455,429 + BWI76_RS21265 0.64 -4.8 4,455,934 - BWI76_RS21265 0.77 -4.4 4,455,995 - BWI76_RS21265 0.79 -3.9 4,456,010 + BWI76_RS21265 0.79 -3.8 4,456,176 + BWI76_RS21265 0.84 -3.9 4,456,509 + -5.3 4,456,517 - -3.1 4,456,534 - -3.3 4,456,609 + -5.0 4,456,609 + -3.7 4,456,737 - -3.6 4,456,875 - +0.0 4,457,009 - -0.1 4,457,480 + BWI76_RS21275 0.30 +0.1 4,457,524 + BWI76_RS21275 0.33 +0.0 4,457,617 - BWI76_RS21275 0.39 -0.3 4,457,684 + BWI76_RS21275 0.43 +0.5 4,457,738 - BWI76_RS21275 0.46 -0.4
Or see this region's nucleotide sequence