Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20890 and BWI76_RS20895 are separated by 120 nucleotides BWI76_RS20895 and BWI76_RS20900 are separated by 108 nucleotides
BWI76_RS20890: BWI76_RS20890 - neutral zinc metallopeptidase, at 4,368,605 to 4,369,474
_RS20890
BWI76_RS20895: BWI76_RS20895 - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 4,369,595 to 4,370,308
_RS20895
BWI76_RS20900: BWI76_RS20900 - outer membrane protein assembly factor BamC, at 4,370,417 to 4,371,451
_RS20900
Position (kb) 4369
4370
4371 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 4368.632 kb on - strand at 4368.632 kb on - strand at 4368.806 kb on + strand, within BWI76_RS20890 at 4368.836 kb on - strand, within BWI76_RS20890 at 4368.978 kb on + strand, within BWI76_RS20890 at 4368.986 kb on - strand, within BWI76_RS20890 at 4368.986 kb on - strand, within BWI76_RS20890 at 4369.069 kb on - strand, within BWI76_RS20890 at 4369.071 kb on - strand, within BWI76_RS20890 at 4369.646 kb on - strand at 4369.705 kb on - strand, within BWI76_RS20895 at 4369.745 kb on - strand, within BWI76_RS20895 at 4369.755 kb on + strand, within BWI76_RS20895 at 4369.755 kb on + strand, within BWI76_RS20895 at 4369.755 kb on + strand, within BWI76_RS20895 at 4370.032 kb on - strand, within BWI76_RS20895 at 4370.095 kb on + strand, within BWI76_RS20895 at 4370.460 kb on + strand at 4370.759 kb on - strand, within BWI76_RS20900 at 4370.981 kb on + strand, within BWI76_RS20900
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,368,632 - -0.2 4,368,632 - -0.0 4,368,806 + BWI76_RS20890 0.23 +0.6 4,368,836 - BWI76_RS20890 0.27 +0.1 4,368,978 + BWI76_RS20890 0.43 -3.4 4,368,986 - BWI76_RS20890 0.44 +0.0 4,368,986 - BWI76_RS20890 0.44 -0.4 4,369,069 - BWI76_RS20890 0.53 +0.8 4,369,071 - BWI76_RS20890 0.54 -1.1 4,369,646 - -2.1 4,369,705 - BWI76_RS20895 0.15 -3.8 4,369,745 - BWI76_RS20895 0.21 -5.3 4,369,755 + BWI76_RS20895 0.22 -2.3 4,369,755 + BWI76_RS20895 0.22 -1.8 4,369,755 + BWI76_RS20895 0.22 -3.5 4,370,032 - BWI76_RS20895 0.61 -2.6 4,370,095 + BWI76_RS20895 0.70 -4.2 4,370,460 + +0.1 4,370,759 - BWI76_RS20900 0.33 +0.2 4,370,981 + BWI76_RS20900 0.54 -0.9
Or see this region's nucleotide sequence