Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20705

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS20695 and BWI76_RS20700 overlap by 1 nucleotidesBWI76_RS20700 and BWI76_RS20705 overlap by 1 nucleotidesBWI76_RS20705 and BWI76_RS20710 are separated by 219 nucleotides BWI76_RS20695: BWI76_RS20695 - sulfate/thiosulfate transporter permease subunit, at 4,328,951 to 4,329,826 _RS20695 BWI76_RS20700: BWI76_RS20700 - sulfate/thiosulfate transporter subunit, at 4,329,826 to 4,330,659 _RS20700 BWI76_RS20705: BWI76_RS20705 - thiosulfate transporter subunit, at 4,330,659 to 4,331,675 _RS20705 BWI76_RS20710: BWI76_RS20710 - dyp-type peroxidase family protein, at 4,331,895 to 4,332,794 _RS20710 Position (kb) 4330 4331 4332Strain fitness (log2 ratio) -3 -2 -1 0 1at 4329.748 kb on + strandat 4329.874 kb on - strandat 4330.165 kb on + strand, within BWI76_RS20700at 4330.224 kb on - strand, within BWI76_RS20700at 4330.325 kb on - strand, within BWI76_RS20700at 4330.512 kb on + strand, within BWI76_RS20700at 4330.514 kb on + strand, within BWI76_RS20700at 4330.520 kb on - strand, within BWI76_RS20700at 4330.980 kb on + strand, within BWI76_RS20705at 4331.072 kb on - strand, within BWI76_RS20705at 4331.253 kb on + strand, within BWI76_RS20705at 4331.340 kb on - strand, within BWI76_RS20705at 4331.370 kb on - strand, within BWI76_RS20705at 4331.440 kb on - strand, within BWI76_RS20705at 4331.509 kb on + strand, within BWI76_RS20705at 4331.586 kb on + strandat 4331.737 kb on + strandat 4331.874 kb on + strandat 4331.916 kb on - strandat 4332.025 kb on - strandat 4332.106 kb on + strand, within BWI76_RS20710at 4332.157 kb on - strand, within BWI76_RS20710at 4332.157 kb on - strand, within BWI76_RS20710at 4332.245 kb on - strand, within BWI76_RS20710at 4332.251 kb on + strand, within BWI76_RS20710at 4332.392 kb on + strand, within BWI76_RS20710at 4332.482 kb on - strand, within BWI76_RS20710

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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4,329,748 + -1.2
4,329,874 - -0.6
4,330,165 + BWI76_RS20700 0.41 -1.0
4,330,224 - BWI76_RS20700 0.48 -0.6
4,330,325 - BWI76_RS20700 0.60 -0.5
4,330,512 + BWI76_RS20700 0.82 -0.5
4,330,514 + BWI76_RS20700 0.82 -1.1
4,330,520 - BWI76_RS20700 0.83 -1.2
4,330,980 + BWI76_RS20705 0.32 -2.0
4,331,072 - BWI76_RS20705 0.41 -0.6
4,331,253 + BWI76_RS20705 0.58 -2.0
4,331,340 - BWI76_RS20705 0.67 -0.2
4,331,370 - BWI76_RS20705 0.70 -0.7
4,331,440 - BWI76_RS20705 0.77 -1.0
4,331,509 + BWI76_RS20705 0.84 -1.1
4,331,586 + -0.8
4,331,737 + -0.8
4,331,874 + -1.2
4,331,916 - +0.1
4,332,025 - -0.7
4,332,106 + BWI76_RS20710 0.23 +0.3
4,332,157 - BWI76_RS20710 0.29 +0.0
4,332,157 - BWI76_RS20710 0.29 -0.7
4,332,245 - BWI76_RS20710 0.39 -0.4
4,332,251 + BWI76_RS20710 0.40 -0.3
4,332,392 + BWI76_RS20710 0.55 -2.6
4,332,482 - BWI76_RS20710 0.65 -3.2

Or see this region's nucleotide sequence