Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20635 and BWI76_RS20640 are separated by 159 nucleotides BWI76_RS20640 and BWI76_RS20645 are separated by 381 nucleotides BWI76_RS20645 and BWI76_RS20650 are separated by 44 nucleotides
BWI76_RS20635: BWI76_RS20635 - sulfate transporter CysZ, at 4,318,287 to 4,319,048
_RS20635
BWI76_RS20640: BWI76_RS20640 - cysteine synthase A, at 4,319,208 to 4,320,179
_RS20640
BWI76_RS20645: BWI76_RS20645 - phosphocarrier protein HPr, at 4,320,561 to 4,320,818
_RS20645
BWI76_RS20650: BWI76_RS20650 - phosphoenolpyruvate--protein phosphotransferase, at 4,320,863 to 4,322,590
_RS20650
Position (kb) 4319
4320
4321 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4318.350 kb on - strand at 4318.443 kb on + strand, within BWI76_RS20635 at 4318.539 kb on - strand, within BWI76_RS20635 at 4318.624 kb on - strand, within BWI76_RS20635 at 4318.864 kb on - strand, within BWI76_RS20635 at 4318.897 kb on + strand, within BWI76_RS20635 at 4318.970 kb on - strand, within BWI76_RS20635 at 4319.067 kb on + strand at 4319.160 kb on + strand at 4319.202 kb on - strand at 4319.239 kb on + strand at 4319.461 kb on + strand, within BWI76_RS20640 at 4319.469 kb on - strand, within BWI76_RS20640 at 4319.483 kb on + strand, within BWI76_RS20640 at 4319.507 kb on + strand, within BWI76_RS20640 at 4319.530 kb on + strand, within BWI76_RS20640 at 4319.820 kb on - strand, within BWI76_RS20640 at 4319.865 kb on - strand, within BWI76_RS20640 at 4320.263 kb on - strand at 4320.449 kb on + strand at 4320.786 kb on - strand, within BWI76_RS20645 at 4321.146 kb on - strand, within BWI76_RS20650
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,318,350 - -1.0 4,318,443 + BWI76_RS20635 0.20 +1.4 4,318,539 - BWI76_RS20635 0.33 +0.2 4,318,624 - BWI76_RS20635 0.44 +1.2 4,318,864 - BWI76_RS20635 0.76 +0.8 4,318,897 + BWI76_RS20635 0.80 +0.4 4,318,970 - BWI76_RS20635 0.90 -0.4 4,319,067 + +1.3 4,319,160 + +1.0 4,319,202 - -1.7 4,319,239 + -0.1 4,319,461 + BWI76_RS20640 0.26 -1.8 4,319,469 - BWI76_RS20640 0.27 -1.3 4,319,483 + BWI76_RS20640 0.28 -1.5 4,319,507 + BWI76_RS20640 0.31 -3.0 4,319,530 + BWI76_RS20640 0.33 -2.5 4,319,820 - BWI76_RS20640 0.63 -1.1 4,319,865 - BWI76_RS20640 0.68 -1.1 4,320,263 - +0.6 4,320,449 + -0.9 4,320,786 - BWI76_RS20645 0.87 +0.3 4,321,146 - BWI76_RS20650 0.16 -1.1
Or see this region's nucleotide sequence