Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19690

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19685 and BWI76_RS19690 are separated by 158 nucleotidesBWI76_RS19690 and BWI76_RS19695 are separated by 173 nucleotides BWI76_RS19685: BWI76_RS19685 - lysine transporter, at 4,113,634 to 4,115,103 _RS19685 BWI76_RS19690: BWI76_RS19690 - LysR family transcriptional regulator, at 4,115,262 to 4,116,128 _RS19690 BWI76_RS19695: BWI76_RS19695 - membrane protein, at 4,116,302 to 4,117,351 _RS19695 Position (kb) 4115 4116 4117Strain fitness (log2 ratio) -3 -2 -1 0 1at 4114.351 kb on - strand, within BWI76_RS19685at 4114.361 kb on + strand, within BWI76_RS19685at 4114.706 kb on - strand, within BWI76_RS19685at 4114.810 kb on - strand, within BWI76_RS19685at 4114.820 kb on + strand, within BWI76_RS19685at 4114.935 kb on + strand, within BWI76_RS19685at 4114.943 kb on - strand, within BWI76_RS19685at 4115.149 kb on - strandat 4115.558 kb on - strand, within BWI76_RS19690at 4116.025 kb on - strand, within BWI76_RS19690at 4116.174 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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4,114,351 - BWI76_RS19685 0.49 -1.2
4,114,361 + BWI76_RS19685 0.49 -2.9
4,114,706 - BWI76_RS19685 0.73 -2.3
4,114,810 - BWI76_RS19685 0.80 -1.6
4,114,820 + BWI76_RS19685 0.81 -2.8
4,114,935 + BWI76_RS19685 0.89 -1.0
4,114,943 - BWI76_RS19685 0.89 +0.9
4,115,149 - -0.3
4,115,558 - BWI76_RS19690 0.34 -1.0
4,116,025 - BWI76_RS19690 0.88 -0.9
4,116,174 - +0.4

Or see this region's nucleotide sequence