Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19040

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19035 and BWI76_RS19040 are separated by 23 nucleotidesBWI76_RS19040 and BWI76_RS19045 are separated by 37 nucleotides BWI76_RS19035: BWI76_RS19035 - dTDP-rhamnosyl transferase, at 3,953,306 to 3,954,193 _RS19035 BWI76_RS19040: BWI76_RS19040 - hypothetical protein, at 3,954,217 to 3,955,347 _RS19040 BWI76_RS19045: BWI76_RS19045 - capsular polysaccharide biosynthesis protein, at 3,955,385 to 3,956,353 _RS19045 Position (kb) 3954 3955 3956Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3953.512 kb on - strand, within BWI76_RS19035at 3953.512 kb on - strand, within BWI76_RS19035at 3953.524 kb on - strand, within BWI76_RS19035at 3953.539 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.580 kb on - strand, within BWI76_RS19035at 3953.635 kb on - strand, within BWI76_RS19035at 3953.638 kb on - strand, within BWI76_RS19035at 3953.638 kb on - strand, within BWI76_RS19035at 3953.638 kb on - strand, within BWI76_RS19035at 3953.645 kb on - strand, within BWI76_RS19035at 3953.683 kb on - strand, within BWI76_RS19035at 3953.692 kb on - strand, within BWI76_RS19035at 3953.709 kb on - strand, within BWI76_RS19035at 3953.823 kb on - strand, within BWI76_RS19035at 3953.851 kb on - strand, within BWI76_RS19035at 3953.859 kb on - strand, within BWI76_RS19035at 3954.059 kb on - strand, within BWI76_RS19035at 3954.125 kb on - strandat 3954.253 kb on - strandat 3954.358 kb on - strand, within BWI76_RS19040at 3954.461 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.506 kb on - strand, within BWI76_RS19040at 3954.506 kb on - strand, within BWI76_RS19040at 3954.714 kb on - strand, within BWI76_RS19040at 3954.782 kb on - strand, within BWI76_RS19040at 3955.187 kb on - strand, within BWI76_RS19040at 3955.673 kb on - strand, within BWI76_RS19045at 3955.800 kb on - strand, within BWI76_RS19045at 3955.800 kb on - strand, within BWI76_RS19045at 3955.810 kb on - strand, within BWI76_RS19045at 3955.810 kb on - strand, within BWI76_RS19045at 3955.810 kb on - strand, within BWI76_RS19045at 3955.948 kb on - strand, within BWI76_RS19045at 3955.967 kb on - strand, within BWI76_RS19045at 3956.156 kb on - strand, within BWI76_RS19045at 3956.169 kb on - strand, within BWI76_RS19045at 3956.169 kb on - strand, within BWI76_RS19045at 3956.286 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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3,953,512 - BWI76_RS19035 0.23 +0.5
3,953,512 - BWI76_RS19035 0.23 -0.4
3,953,524 - BWI76_RS19035 0.25 -1.4
3,953,539 - BWI76_RS19035 0.26 -0.5
3,953,578 - BWI76_RS19035 0.31 -1.8
3,953,578 - BWI76_RS19035 0.31 +1.1
3,953,578 - BWI76_RS19035 0.31 -0.5
3,953,578 - BWI76_RS19035 0.31 -0.5
3,953,578 - BWI76_RS19035 0.31 -0.5
3,953,578 - BWI76_RS19035 0.31 -1.8
3,953,580 - BWI76_RS19035 0.31 -0.8
3,953,635 - BWI76_RS19035 0.37 -1.2
3,953,638 - BWI76_RS19035 0.37 -2.8
3,953,638 - BWI76_RS19035 0.37 -0.2
3,953,638 - BWI76_RS19035 0.37 +2.3
3,953,645 - BWI76_RS19035 0.38 -1.2
3,953,683 - BWI76_RS19035 0.42 -1.2
3,953,692 - BWI76_RS19035 0.43 -0.5
3,953,709 - BWI76_RS19035 0.45 -1.5
3,953,823 - BWI76_RS19035 0.58 -0.0
3,953,851 - BWI76_RS19035 0.61 -2.0
3,953,859 - BWI76_RS19035 0.62 -0.5
3,954,059 - BWI76_RS19035 0.85 -0.5
3,954,125 - -1.0
3,954,253 - -0.0
3,954,358 - BWI76_RS19040 0.12 +0.8
3,954,461 - BWI76_RS19040 0.22 -0.9
3,954,496 - BWI76_RS19040 0.25 -0.5
3,954,496 - BWI76_RS19040 0.25 -0.6
3,954,496 - BWI76_RS19040 0.25 -1.6
3,954,506 - BWI76_RS19040 0.26 -1.9
3,954,506 - BWI76_RS19040 0.26 -1.3
3,954,714 - BWI76_RS19040 0.44 -0.2
3,954,782 - BWI76_RS19040 0.50 -1.7
3,955,187 - BWI76_RS19040 0.86 -1.0
3,955,673 - BWI76_RS19045 0.30 -0.3
3,955,800 - BWI76_RS19045 0.43 -0.5
3,955,800 - BWI76_RS19045 0.43 -0.0
3,955,810 - BWI76_RS19045 0.44 +0.4
3,955,810 - BWI76_RS19045 0.44 +1.0
3,955,810 - BWI76_RS19045 0.44 -0.1
3,955,948 - BWI76_RS19045 0.58 +1.7
3,955,967 - BWI76_RS19045 0.60 -1.1
3,956,156 - BWI76_RS19045 0.80 -0.7
3,956,169 - BWI76_RS19045 0.81 -0.0
3,956,169 - BWI76_RS19045 0.81 -0.7
3,956,286 - +0.6

Or see this region's nucleotide sequence