Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18710 and BWI76_RS18715 are separated by 10 nucleotides BWI76_RS18715 and BWI76_RS18720 are separated by 303 nucleotides
BWI76_RS18710: BWI76_RS18710 - GGDEF-domain containing protein, at 3,878,438 to 3,880,363
_RS18710
BWI76_RS18715: BWI76_RS18715 - hypothetical protein, at 3,880,374 to 3,880,871
_RS18715
BWI76_RS18720: BWI76_RS18720 - MFS transporter, at 3,881,175 to 3,882,509
_RS18720
Position (kb)
3880
3881 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3879.569 kb on - strand, within BWI76_RS18710 at 3879.600 kb on + strand, within BWI76_RS18710 at 3879.653 kb on - strand, within BWI76_RS18710 at 3879.687 kb on + strand, within BWI76_RS18710 at 3879.715 kb on - strand, within BWI76_RS18710 at 3879.732 kb on - strand, within BWI76_RS18710 at 3879.743 kb on - strand, within BWI76_RS18710 at 3879.782 kb on - strand, within BWI76_RS18710 at 3879.786 kb on + strand, within BWI76_RS18710 at 3879.786 kb on + strand, within BWI76_RS18710 at 3879.794 kb on - strand, within BWI76_RS18710 at 3879.794 kb on - strand, within BWI76_RS18710 at 3879.811 kb on + strand, within BWI76_RS18710 at 3879.811 kb on + strand at 3879.811 kb on + strand, within BWI76_RS18710 at 3879.819 kb on - strand, within BWI76_RS18710 at 3879.819 kb on - strand, within BWI76_RS18710 at 3879.819 kb on - strand, within BWI76_RS18710 at 3879.827 kb on - strand, within BWI76_RS18710 at 3879.827 kb on - strand, within BWI76_RS18710 at 3879.925 kb on + strand, within BWI76_RS18710 at 3879.968 kb on - strand, within BWI76_RS18710 at 3879.989 kb on - strand, within BWI76_RS18710 at 3880.005 kb on + strand, within BWI76_RS18710 at 3880.153 kb on + strand, within BWI76_RS18710 at 3880.164 kb on - strand, within BWI76_RS18710 at 3880.178 kb on - strand at 3880.185 kb on - strand at 3880.185 kb on - strand at 3880.186 kb on - strand at 3880.191 kb on + strand at 3880.203 kb on + strand at 3880.257 kb on - strand at 3880.364 kb on + strand at 3880.373 kb on - strand at 3880.373 kb on - strand at 3880.373 kb on - strand at 3880.406 kb on - strand at 3880.447 kb on + strand, within BWI76_RS18715 at 3880.455 kb on + strand, within BWI76_RS18715 at 3880.563 kb on - strand, within BWI76_RS18715 at 3880.564 kb on - strand, within BWI76_RS18715 at 3880.564 kb on - strand, within BWI76_RS18715 at 3880.567 kb on + strand, within BWI76_RS18715 at 3880.575 kb on - strand, within BWI76_RS18715 at 3880.575 kb on - strand, within BWI76_RS18715 at 3880.575 kb on - strand, within BWI76_RS18715 at 3880.575 kb on - strand, within BWI76_RS18715 at 3880.681 kb on + strand, within BWI76_RS18715 at 3880.681 kb on + strand, within BWI76_RS18715 at 3880.681 kb on + strand, within BWI76_RS18715 at 3880.689 kb on - strand, within BWI76_RS18715 at 3880.689 kb on - strand, within BWI76_RS18715 at 3880.691 kb on - strand, within BWI76_RS18715 at 3880.699 kb on - strand, within BWI76_RS18715 at 3880.746 kb on - strand, within BWI76_RS18715 at 3880.746 kb on - strand, within BWI76_RS18715 at 3880.786 kb on + strand, within BWI76_RS18715 at 3880.802 kb on - strand, within BWI76_RS18715 at 3880.848 kb on - strand at 3880.921 kb on - strand at 3880.984 kb on + strand at 3881.012 kb on + strand at 3881.015 kb on - strand at 3881.027 kb on + strand at 3881.033 kb on + strand at 3881.035 kb on - strand at 3881.041 kb on - strand at 3881.047 kb on - strand at 3881.048 kb on - strand at 3881.057 kb on + strand at 3881.065 kb on - strand at 3881.065 kb on - strand at 3881.103 kb on + strand at 3881.103 kb on + strand at 3881.109 kb on + strand at 3881.111 kb on - strand at 3881.111 kb on - strand at 3881.129 kb on - strand at 3881.129 kb on - strand at 3881.162 kb on + strand at 3881.167 kb on + strand at 3881.172 kb on + strand at 3881.172 kb on + strand at 3881.172 kb on + strand at 3881.172 kb on + strand at 3881.172 kb on + strand at 3881.172 kb on + strand at 3881.172 kb on + strand at 3881.175 kb on - strand at 3881.180 kb on - strand at 3881.180 kb on - strand at 3881.180 kb on - strand at 3881.180 kb on - strand at 3881.180 kb on - strand at 3881.180 kb on - strand at 3881.180 kb on - strand at 3881.185 kb on - strand at 3881.244 kb on + strand at 3881.360 kb on - strand, within BWI76_RS18720 at 3881.452 kb on - strand, within BWI76_RS18720 at 3881.581 kb on + strand, within BWI76_RS18720 at 3881.582 kb on - strand, within BWI76_RS18720 at 3881.589 kb on - strand, within BWI76_RS18720 at 3881.868 kb on + strand, within BWI76_RS18720
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,879,569 - BWI76_RS18710 0.59 -1.0 3,879,600 + BWI76_RS18710 0.60 -0.3 3,879,653 - BWI76_RS18710 0.63 +0.1 3,879,687 + BWI76_RS18710 0.65 -0.3 3,879,715 - BWI76_RS18710 0.66 -1.1 3,879,732 - BWI76_RS18710 0.67 -0.4 3,879,743 - BWI76_RS18710 0.68 -1.1 3,879,782 - BWI76_RS18710 0.70 -0.5 3,879,786 + BWI76_RS18710 0.70 -0.8 3,879,786 + BWI76_RS18710 0.70 +0.2 3,879,794 - BWI76_RS18710 0.70 -1.5 3,879,794 - BWI76_RS18710 0.70 -0.2 3,879,811 + BWI76_RS18710 0.71 +0.0 3,879,811 + +0.2 3,879,811 + BWI76_RS18710 0.71 +1.1 3,879,819 - BWI76_RS18710 0.72 -0.2 3,879,819 - BWI76_RS18710 0.72 +0.2 3,879,819 - BWI76_RS18710 0.72 -1.6 3,879,827 - BWI76_RS18710 0.72 -0.4 3,879,827 - BWI76_RS18710 0.72 -0.8 3,879,925 + BWI76_RS18710 0.77 -2.8 3,879,968 - BWI76_RS18710 0.79 -0.4 3,879,989 - BWI76_RS18710 0.81 -1.3 3,880,005 + BWI76_RS18710 0.81 -1.5 3,880,153 + BWI76_RS18710 0.89 -0.9 3,880,164 - BWI76_RS18710 0.90 +1.2 3,880,178 - -1.4 3,880,185 - -0.1 3,880,185 - +0.2 3,880,186 - -0.3 3,880,191 + -0.3 3,880,203 + +0.5 3,880,257 - -2.9 3,880,364 + -0.5 3,880,373 - -1.2 3,880,373 - -0.9 3,880,373 - +0.5 3,880,406 - -1.0 3,880,447 + BWI76_RS18715 0.15 -0.9 3,880,455 + BWI76_RS18715 0.16 +0.4 3,880,563 - BWI76_RS18715 0.38 -2.4 3,880,564 - BWI76_RS18715 0.38 -1.0 3,880,564 - BWI76_RS18715 0.38 -3.0 3,880,567 + BWI76_RS18715 0.39 -1.5 3,880,575 - BWI76_RS18715 0.40 -2.0 3,880,575 - BWI76_RS18715 0.40 -1.3 3,880,575 - BWI76_RS18715 0.40 +0.8 3,880,575 - BWI76_RS18715 0.40 -1.3 3,880,681 + BWI76_RS18715 0.62 +0.8 3,880,681 + BWI76_RS18715 0.62 +1.0 3,880,681 + BWI76_RS18715 0.62 +0.6 3,880,689 - BWI76_RS18715 0.63 +1.6 3,880,689 - BWI76_RS18715 0.63 +0.4 3,880,691 - BWI76_RS18715 0.64 -0.7 3,880,699 - BWI76_RS18715 0.65 +0.2 3,880,746 - BWI76_RS18715 0.75 -1.6 3,880,746 - BWI76_RS18715 0.75 -3.0 3,880,786 + BWI76_RS18715 0.83 -1.6 3,880,802 - BWI76_RS18715 0.86 -1.3 3,880,848 - -1.2 3,880,921 - +0.4 3,880,984 + -0.3 3,881,012 + -0.8 3,881,015 - +0.6 3,881,027 + +0.1 3,881,033 + -2.0 3,881,035 - -0.5 3,881,041 - +0.1 3,881,047 - +0.0 3,881,048 - +0.5 3,881,057 + -1.2 3,881,065 - -0.2 3,881,065 - -0.5 3,881,103 + +0.8 3,881,103 + +0.2 3,881,109 + -0.1 3,881,111 - -0.0 3,881,111 - -0.5 3,881,129 - -0.1 3,881,129 - +0.4 3,881,162 + -0.5 3,881,167 + -0.2 3,881,172 + +0.1 3,881,172 + +0.0 3,881,172 + +0.3 3,881,172 + -0.8 3,881,172 + +1.2 3,881,172 + -0.3 3,881,172 + -0.2 3,881,175 - -1.8 3,881,180 - -0.5 3,881,180 - +0.2 3,881,180 - +0.2 3,881,180 - +0.3 3,881,180 - -0.5 3,881,180 - -0.7 3,881,180 - -0.1 3,881,185 - +0.5 3,881,244 + -0.9 3,881,360 - BWI76_RS18720 0.14 -0.0 3,881,452 - BWI76_RS18720 0.21 -0.1 3,881,581 + BWI76_RS18720 0.30 -0.6 3,881,582 - BWI76_RS18720 0.30 +0.9 3,881,589 - BWI76_RS18720 0.31 -0.8 3,881,868 + BWI76_RS18720 0.52 +0.1
Or see this region's nucleotide sequence