Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18715

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18710 and BWI76_RS18715 are separated by 10 nucleotidesBWI76_RS18715 and BWI76_RS18720 are separated by 303 nucleotides BWI76_RS18710: BWI76_RS18710 - GGDEF-domain containing protein, at 3,878,438 to 3,880,363 _RS18710 BWI76_RS18715: BWI76_RS18715 - hypothetical protein, at 3,880,374 to 3,880,871 _RS18715 BWI76_RS18720: BWI76_RS18720 - MFS transporter, at 3,881,175 to 3,882,509 _RS18720 Position (kb) 3880 3881Strain fitness (log2 ratio) -3 -2 -1 0 1at 3879.569 kb on - strand, within BWI76_RS18710at 3879.600 kb on + strand, within BWI76_RS18710at 3879.653 kb on - strand, within BWI76_RS18710at 3879.687 kb on + strand, within BWI76_RS18710at 3879.715 kb on - strand, within BWI76_RS18710at 3879.732 kb on - strand, within BWI76_RS18710at 3879.743 kb on - strand, within BWI76_RS18710at 3879.782 kb on - strand, within BWI76_RS18710at 3879.786 kb on + strand, within BWI76_RS18710at 3879.786 kb on + strand, within BWI76_RS18710at 3879.794 kb on - strand, within BWI76_RS18710at 3879.794 kb on - strand, within BWI76_RS18710at 3879.811 kb on + strand, within BWI76_RS18710at 3879.811 kb on + strandat 3879.811 kb on + strand, within BWI76_RS18710at 3879.819 kb on - strand, within BWI76_RS18710at 3879.819 kb on - strand, within BWI76_RS18710at 3879.819 kb on - strand, within BWI76_RS18710at 3879.827 kb on - strand, within BWI76_RS18710at 3879.827 kb on - strand, within BWI76_RS18710at 3879.925 kb on + strand, within BWI76_RS18710at 3879.968 kb on - strand, within BWI76_RS18710at 3879.989 kb on - strand, within BWI76_RS18710at 3880.005 kb on + strand, within BWI76_RS18710at 3880.153 kb on + strand, within BWI76_RS18710at 3880.164 kb on - strand, within BWI76_RS18710at 3880.178 kb on - strandat 3880.185 kb on - strandat 3880.185 kb on - strandat 3880.186 kb on - strandat 3880.191 kb on + strandat 3880.203 kb on + strandat 3880.257 kb on - strandat 3880.364 kb on + strandat 3880.373 kb on - strandat 3880.373 kb on - strandat 3880.373 kb on - strandat 3880.406 kb on - strandat 3880.447 kb on + strand, within BWI76_RS18715at 3880.455 kb on + strand, within BWI76_RS18715at 3880.563 kb on - strand, within BWI76_RS18715at 3880.564 kb on - strand, within BWI76_RS18715at 3880.564 kb on - strand, within BWI76_RS18715at 3880.567 kb on + strand, within BWI76_RS18715at 3880.575 kb on - strand, within BWI76_RS18715at 3880.575 kb on - strand, within BWI76_RS18715at 3880.575 kb on - strand, within BWI76_RS18715at 3880.575 kb on - strand, within BWI76_RS18715at 3880.681 kb on + strand, within BWI76_RS18715at 3880.681 kb on + strand, within BWI76_RS18715at 3880.681 kb on + strand, within BWI76_RS18715at 3880.689 kb on - strand, within BWI76_RS18715at 3880.689 kb on - strand, within BWI76_RS18715at 3880.691 kb on - strand, within BWI76_RS18715at 3880.699 kb on - strand, within BWI76_RS18715at 3880.746 kb on - strand, within BWI76_RS18715at 3880.746 kb on - strand, within BWI76_RS18715at 3880.786 kb on + strand, within BWI76_RS18715at 3880.802 kb on - strand, within BWI76_RS18715at 3880.848 kb on - strandat 3880.921 kb on - strandat 3880.984 kb on + strandat 3881.012 kb on + strandat 3881.015 kb on - strandat 3881.027 kb on + strandat 3881.033 kb on + strandat 3881.035 kb on - strandat 3881.041 kb on - strandat 3881.047 kb on - strandat 3881.048 kb on - strandat 3881.057 kb on + strandat 3881.065 kb on - strandat 3881.065 kb on - strandat 3881.103 kb on + strandat 3881.103 kb on + strandat 3881.109 kb on + strandat 3881.111 kb on - strandat 3881.111 kb on - strandat 3881.129 kb on - strandat 3881.129 kb on - strandat 3881.162 kb on + strandat 3881.167 kb on + strandat 3881.172 kb on + strandat 3881.172 kb on + strandat 3881.172 kb on + strandat 3881.172 kb on + strandat 3881.172 kb on + strandat 3881.172 kb on + strandat 3881.172 kb on + strandat 3881.175 kb on - strandat 3881.180 kb on - strandat 3881.180 kb on - strandat 3881.180 kb on - strandat 3881.180 kb on - strandat 3881.180 kb on - strandat 3881.180 kb on - strandat 3881.180 kb on - strandat 3881.185 kb on - strandat 3881.244 kb on + strandat 3881.360 kb on - strand, within BWI76_RS18720at 3881.452 kb on - strand, within BWI76_RS18720at 3881.581 kb on + strand, within BWI76_RS18720at 3881.582 kb on - strand, within BWI76_RS18720at 3881.589 kb on - strand, within BWI76_RS18720at 3881.868 kb on + strand, within BWI76_RS18720

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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3,879,569 - BWI76_RS18710 0.59 -1.0
3,879,600 + BWI76_RS18710 0.60 -0.3
3,879,653 - BWI76_RS18710 0.63 +0.1
3,879,687 + BWI76_RS18710 0.65 -0.3
3,879,715 - BWI76_RS18710 0.66 -1.1
3,879,732 - BWI76_RS18710 0.67 -0.4
3,879,743 - BWI76_RS18710 0.68 -1.1
3,879,782 - BWI76_RS18710 0.70 -0.5
3,879,786 + BWI76_RS18710 0.70 -0.8
3,879,786 + BWI76_RS18710 0.70 +0.2
3,879,794 - BWI76_RS18710 0.70 -1.5
3,879,794 - BWI76_RS18710 0.70 -0.2
3,879,811 + BWI76_RS18710 0.71 +0.0
3,879,811 + +0.2
3,879,811 + BWI76_RS18710 0.71 +1.1
3,879,819 - BWI76_RS18710 0.72 -0.2
3,879,819 - BWI76_RS18710 0.72 +0.2
3,879,819 - BWI76_RS18710 0.72 -1.6
3,879,827 - BWI76_RS18710 0.72 -0.4
3,879,827 - BWI76_RS18710 0.72 -0.8
3,879,925 + BWI76_RS18710 0.77 -2.8
3,879,968 - BWI76_RS18710 0.79 -0.4
3,879,989 - BWI76_RS18710 0.81 -1.3
3,880,005 + BWI76_RS18710 0.81 -1.5
3,880,153 + BWI76_RS18710 0.89 -0.9
3,880,164 - BWI76_RS18710 0.90 +1.2
3,880,178 - -1.4
3,880,185 - -0.1
3,880,185 - +0.2
3,880,186 - -0.3
3,880,191 + -0.3
3,880,203 + +0.5
3,880,257 - -2.9
3,880,364 + -0.5
3,880,373 - -1.2
3,880,373 - -0.9
3,880,373 - +0.5
3,880,406 - -1.0
3,880,447 + BWI76_RS18715 0.15 -0.9
3,880,455 + BWI76_RS18715 0.16 +0.4
3,880,563 - BWI76_RS18715 0.38 -2.4
3,880,564 - BWI76_RS18715 0.38 -1.0
3,880,564 - BWI76_RS18715 0.38 -3.0
3,880,567 + BWI76_RS18715 0.39 -1.5
3,880,575 - BWI76_RS18715 0.40 -2.0
3,880,575 - BWI76_RS18715 0.40 -1.3
3,880,575 - BWI76_RS18715 0.40 +0.8
3,880,575 - BWI76_RS18715 0.40 -1.3
3,880,681 + BWI76_RS18715 0.62 +0.8
3,880,681 + BWI76_RS18715 0.62 +1.0
3,880,681 + BWI76_RS18715 0.62 +0.6
3,880,689 - BWI76_RS18715 0.63 +1.6
3,880,689 - BWI76_RS18715 0.63 +0.4
3,880,691 - BWI76_RS18715 0.64 -0.7
3,880,699 - BWI76_RS18715 0.65 +0.2
3,880,746 - BWI76_RS18715 0.75 -1.6
3,880,746 - BWI76_RS18715 0.75 -3.0
3,880,786 + BWI76_RS18715 0.83 -1.6
3,880,802 - BWI76_RS18715 0.86 -1.3
3,880,848 - -1.2
3,880,921 - +0.4
3,880,984 + -0.3
3,881,012 + -0.8
3,881,015 - +0.6
3,881,027 + +0.1
3,881,033 + -2.0
3,881,035 - -0.5
3,881,041 - +0.1
3,881,047 - +0.0
3,881,048 - +0.5
3,881,057 + -1.2
3,881,065 - -0.2
3,881,065 - -0.5
3,881,103 + +0.8
3,881,103 + +0.2
3,881,109 + -0.1
3,881,111 - -0.0
3,881,111 - -0.5
3,881,129 - -0.1
3,881,129 - +0.4
3,881,162 + -0.5
3,881,167 + -0.2
3,881,172 + +0.1
3,881,172 + +0.0
3,881,172 + +0.3
3,881,172 + -0.8
3,881,172 + +1.2
3,881,172 + -0.3
3,881,172 + -0.2
3,881,175 - -1.8
3,881,180 - -0.5
3,881,180 - +0.2
3,881,180 - +0.2
3,881,180 - +0.3
3,881,180 - -0.5
3,881,180 - -0.7
3,881,180 - -0.1
3,881,185 - +0.5
3,881,244 + -0.9
3,881,360 - BWI76_RS18720 0.14 -0.0
3,881,452 - BWI76_RS18720 0.21 -0.1
3,881,581 + BWI76_RS18720 0.30 -0.6
3,881,582 - BWI76_RS18720 0.30 +0.9
3,881,589 - BWI76_RS18720 0.31 -0.8
3,881,868 + BWI76_RS18720 0.52 +0.1

Or see this region's nucleotide sequence