Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18630

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18625 and BWI76_RS18630 are separated by 106 nucleotidesBWI76_RS18630 and BWI76_RS18635 are separated by 330 nucleotides BWI76_RS18625: BWI76_RS18625 - CysB family transcriptional regulator, at 3,861,827 to 3,862,777 _RS18625 BWI76_RS18630: BWI76_RS18630 - nitrogen assimilation transcriptional regulator, at 3,862,884 to 3,863,801 _RS18630 BWI76_RS18635: BWI76_RS18635 - tRNA-Asn, at 3,864,132 to 3,864,207 _RS18635 Position (kb) 3862 3863 3864Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 3861.980 kb on - strand, within BWI76_RS18625at 3862.062 kb on - strand, within BWI76_RS18625at 3862.090 kb on - strand, within BWI76_RS18625at 3862.142 kb on + strand, within BWI76_RS18625at 3862.148 kb on + strand, within BWI76_RS18625at 3862.150 kb on - strand, within BWI76_RS18625at 3862.150 kb on - strand, within BWI76_RS18625at 3862.399 kb on - strand, within BWI76_RS18625at 3862.400 kb on - strand, within BWI76_RS18625at 3862.434 kb on - strand, within BWI76_RS18625at 3862.457 kb on + strand, within BWI76_RS18625at 3862.472 kb on + strand, within BWI76_RS18625at 3862.485 kb on - strand, within BWI76_RS18625at 3862.584 kb on + strand, within BWI76_RS18625at 3862.685 kb on + strandat 3862.695 kb on + strandat 3862.703 kb on - strandat 3862.724 kb on - strandat 3862.776 kb on + strandat 3862.793 kb on + strandat 3862.962 kb on + strandat 3862.962 kb on + strandat 3862.970 kb on - strandat 3862.994 kb on + strand, within BWI76_RS18630at 3863.006 kb on + strand, within BWI76_RS18630at 3863.016 kb on + strand, within BWI76_RS18630at 3863.024 kb on - strand, within BWI76_RS18630at 3863.039 kb on - strand, within BWI76_RS18630at 3863.054 kb on - strand, within BWI76_RS18630at 3863.368 kb on + strand, within BWI76_RS18630at 3863.376 kb on - strand, within BWI76_RS18630at 3863.423 kb on + strand, within BWI76_RS18630at 3863.545 kb on - strand, within BWI76_RS18630at 3863.591 kb on - strand, within BWI76_RS18630at 3863.740 kb on + strandat 3863.816 kb on + strandat 3863.817 kb on - strandat 3863.820 kb on + strandat 3864.285 kb on + strandat 3864.312 kb on + strandat 3864.318 kb on + strandat 3864.388 kb on - strandat 3864.391 kb on + strandat 3864.412 kb on - strandat 3864.508 kb on + strandat 3864.609 kb on + strandat 3864.617 kb on - strandat 3864.617 kb on - strandat 3864.617 kb on - strandat 3864.624 kb on + strandat 3864.624 kb on + strandat 3864.624 kb on + strandat 3864.624 kb on + strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.632 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.635 kb on - strandat 3864.637 kb on + strandat 3864.645 kb on - strandat 3864.645 kb on - strandat 3864.645 kb on - strandat 3864.645 kb on - strandat 3864.645 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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3,861,980 - BWI76_RS18625 0.16 -0.3
3,862,062 - BWI76_RS18625 0.25 +0.8
3,862,090 - BWI76_RS18625 0.28 -0.6
3,862,142 + BWI76_RS18625 0.33 +0.7
3,862,148 + BWI76_RS18625 0.34 -0.2
3,862,150 - BWI76_RS18625 0.34 -0.1
3,862,150 - BWI76_RS18625 0.34 -0.0
3,862,399 - BWI76_RS18625 0.60 -0.2
3,862,400 - BWI76_RS18625 0.60 -0.4
3,862,434 - BWI76_RS18625 0.64 +1.5
3,862,457 + BWI76_RS18625 0.66 +0.0
3,862,472 + BWI76_RS18625 0.68 +0.7
3,862,485 - BWI76_RS18625 0.69 +0.0
3,862,584 + BWI76_RS18625 0.80 +0.5
3,862,685 + +0.5
3,862,695 + -0.5
3,862,703 - +0.0
3,862,724 - -0.2
3,862,776 + -2.1
3,862,793 + -1.5
3,862,962 + -0.2
3,862,962 + -1.2
3,862,970 - -0.7
3,862,994 + BWI76_RS18630 0.12 -1.0
3,863,006 + BWI76_RS18630 0.13 -1.3
3,863,016 + BWI76_RS18630 0.14 -2.2
3,863,024 - BWI76_RS18630 0.15 -1.8
3,863,039 - BWI76_RS18630 0.17 -2.0
3,863,054 - BWI76_RS18630 0.19 -1.3
3,863,368 + BWI76_RS18630 0.53 -1.1
3,863,376 - BWI76_RS18630 0.54 -0.8
3,863,423 + BWI76_RS18630 0.59 -1.2
3,863,545 - BWI76_RS18630 0.72 -2.9
3,863,591 - BWI76_RS18630 0.77 -0.7
3,863,740 + -3.9
3,863,816 + -1.3
3,863,817 - -2.5
3,863,820 + -1.8
3,864,285 + -0.1
3,864,312 + +0.2
3,864,318 + +4.0
3,864,388 - -1.1
3,864,391 + -0.8
3,864,412 - -2.1
3,864,508 + -0.8
3,864,609 + -0.2
3,864,617 - -1.8
3,864,617 - -1.8
3,864,617 - -2.6
3,864,624 + +0.2
3,864,624 + -1.9
3,864,624 + +1.8
3,864,624 + -1.0
3,864,632 - -2.0
3,864,632 - -2.1
3,864,632 - -0.8
3,864,632 - -0.8
3,864,632 - -2.6
3,864,632 - -1.2
3,864,632 - -0.2
3,864,632 - -0.3
3,864,632 - -0.8
3,864,632 - -0.5
3,864,632 - -1.3
3,864,632 - +0.7
3,864,632 - -0.8
3,864,632 - -1.5
3,864,635 - +1.3
3,864,635 - +1.2
3,864,635 - -0.3
3,864,635 - +0.7
3,864,635 - +0.2
3,864,635 - +1.5
3,864,635 - -0.3
3,864,635 - +0.1
3,864,635 - +0.7
3,864,637 + +0.1
3,864,645 - +0.8
3,864,645 - -0.4
3,864,645 - +0.5
3,864,645 - +0.1
3,864,645 - +1.0

Or see this region's nucleotide sequence