Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16235 and BWI76_RS16240 are separated by 990 nucleotides BWI76_RS16240 and BWI76_RS16245 overlap by 93 nucleotides BWI76_RS16245 and BWI76_RS16250 are separated by 213 nucleotides
BWI76_RS16235: BWI76_RS16235 - membrane protein, at 3,367,609 to 3,367,944
_RS16235
BWI76_RS16240: BWI76_RS16240 - anti-adapter protein IraM, at 3,368,935 to 3,369,282
_RS16240
BWI76_RS16245: BWI76_RS16245 - hypothetical protein, at 3,369,190 to 3,369,407
_RS16245
BWI76_RS16250: BWI76_RS16250 - DNA-binding response regulator, at 3,369,621 to 3,370,337
_RS16250
Position (kb)
3368
3369
3370 Strain fitness (log2 ratio)
-1
0
1
2 at 3368.773 kb on - strand at 3368.900 kb on - strand at 3369.038 kb on - strand, within BWI76_RS16240 at 3369.064 kb on + strand, within BWI76_RS16240 at 3369.155 kb on + strand, within BWI76_RS16240 at 3369.169 kb on - strand, within BWI76_RS16240 at 3369.219 kb on + strand at 3369.249 kb on + strand at 3369.257 kb on - strand at 3369.270 kb on - strand at 3369.270 kb on - strand at 3369.272 kb on + strand at 3369.277 kb on + strand at 3369.277 kb on + strand at 3369.277 kb on + strand at 3369.284 kb on + strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.302 kb on - strand, within BWI76_RS16245 at 3369.314 kb on - strand, within BWI76_RS16245 at 3369.314 kb on - strand, within BWI76_RS16245 at 3369.321 kb on + strand, within BWI76_RS16245 at 3369.329 kb on - strand, within BWI76_RS16245 at 3369.329 kb on - strand, within BWI76_RS16245 at 3369.413 kb on + strand at 3369.425 kb on + strand at 3369.425 kb on + strand at 3369.425 kb on + strand at 3369.430 kb on + strand at 3369.433 kb on - strand at 3369.438 kb on - strand at 3369.438 kb on - strand at 3369.438 kb on - strand at 3369.438 kb on - strand at 3369.530 kb on - strand at 3369.556 kb on - strand at 3369.736 kb on + strand, within BWI76_RS16250 at 3369.994 kb on + strand, within BWI76_RS16250 at 3369.994 kb on - strand, within BWI76_RS16250 at 3370.203 kb on + strand, within BWI76_RS16250 at 3370.203 kb on + strand, within BWI76_RS16250
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,368,773 - -1.1 3,368,900 - -1.0 3,369,038 - BWI76_RS16240 0.30 -1.7 3,369,064 + BWI76_RS16240 0.37 -0.4 3,369,155 + BWI76_RS16240 0.63 +0.0 3,369,169 - BWI76_RS16240 0.67 -0.6 3,369,219 + -0.2 3,369,249 + -0.7 3,369,257 - +0.6 3,369,270 - -0.4 3,369,270 - -0.1 3,369,272 + +1.9 3,369,277 + +0.6 3,369,277 + +1.3 3,369,277 + +0.5 3,369,284 + BWI76_RS16245 0.43 +1.1 3,369,285 - BWI76_RS16245 0.44 +0.4 3,369,285 - BWI76_RS16245 0.44 +0.3 3,369,285 - BWI76_RS16245 0.44 +0.4 3,369,285 - BWI76_RS16245 0.44 +0.5 3,369,302 - BWI76_RS16245 0.51 -1.4 3,369,314 - BWI76_RS16245 0.57 -1.3 3,369,314 - BWI76_RS16245 0.57 -1.0 3,369,321 + BWI76_RS16245 0.60 +0.7 3,369,329 - BWI76_RS16245 0.64 -0.5 3,369,329 - BWI76_RS16245 0.64 -0.2 3,369,413 + +1.0 3,369,425 + +1.1 3,369,425 + +0.5 3,369,425 + +0.6 3,369,430 + -0.6 3,369,433 - -1.1 3,369,438 - -1.0 3,369,438 - -0.1 3,369,438 - +0.3 3,369,438 - +0.0 3,369,530 - +0.9 3,369,556 - +0.8 3,369,736 + BWI76_RS16250 0.16 +0.2 3,369,994 + BWI76_RS16250 0.52 +0.1 3,369,994 - BWI76_RS16250 0.52 +0.8 3,370,203 + BWI76_RS16250 0.81 +0.1 3,370,203 + BWI76_RS16250 0.81 +0.3
Or see this region's nucleotide sequence