Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15620

Experiment: L-Glutamic (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS15600 and BWI76_RS15605 overlap by 4 nucleotidesBWI76_RS15605 and BWI76_RS15610 are separated by 2 nucleotidesBWI76_RS15610 and BWI76_RS15615 are separated by 2 nucleotidesBWI76_RS15615 and BWI76_RS15620 overlap by 1 nucleotidesBWI76_RS15620 and BWI76_RS15625 are separated by 60 nucleotidesBWI76_RS15625 and BWI76_RS15630 are separated by 9 nucleotides BWI76_RS15600: BWI76_RS15600 - hypothetical protein, at 3,264,840 to 3,265,223 _RS15600 BWI76_RS15605: BWI76_RS15605 - hypothetical protein, at 3,265,220 to 3,265,588 _RS15605 BWI76_RS15610: BWI76_RS15610 - hypothetical protein, at 3,265,591 to 3,265,953 _RS15610 BWI76_RS15615: BWI76_RS15615 - hypothetical protein, at 3,265,956 to 3,266,126 _RS15615 BWI76_RS15620: BWI76_RS15620 - hypothetical protein, at 3,266,126 to 3,266,527 _RS15620 BWI76_RS15625: BWI76_RS15625 - hypothetical protein, at 3,266,588 to 3,266,770 _RS15625 BWI76_RS15630: BWI76_RS15630 - hypothetical protein, at 3,266,780 to 3,267,856 _RS15630 Position (kb) 3266 3267Strain fitness (log2 ratio) -2 -1 0 1at 3265.209 kb on + strandat 3265.292 kb on - strand, within BWI76_RS15605at 3265.517 kb on - strand, within BWI76_RS15605at 3266.131 kb on - strandat 3266.256 kb on - strand, within BWI76_RS15620at 3266.502 kb on + strandat 3266.510 kb on - strandat 3266.702 kb on - strand, within BWI76_RS15625at 3266.964 kb on - strand, within BWI76_RS15630at 3267.066 kb on + strandat 3267.237 kb on - strand, within BWI76_RS15630at 3267.495 kb on - strand, within BWI76_RS15630

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
remove
3,265,209 + -1.0
3,265,292 - BWI76_RS15605 0.20 +0.2
3,265,517 - BWI76_RS15605 0.80 -0.3
3,266,131 - -0.1
3,266,256 - BWI76_RS15620 0.32 -1.7
3,266,502 + +0.1
3,266,510 - -0.2
3,266,702 - BWI76_RS15625 0.62 -0.5
3,266,964 - BWI76_RS15630 0.17 -2.0
3,267,066 + +0.3
3,267,237 - BWI76_RS15630 0.42 -0.1
3,267,495 - BWI76_RS15630 0.66 -0.6

Or see this region's nucleotide sequence