Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15435

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15430 and BWI76_RS15435 are separated by 102 nucleotidesBWI76_RS15435 and BWI76_RS15440 are separated by 25 nucleotidesBWI76_RS15440 and BWI76_RS15445 are separated by 380 nucleotidesBWI76_RS15445 and BWI76_RS15450 are separated by 62 nucleotides BWI76_RS15430: BWI76_RS15430 - hypothetical protein, at 3,234,917 to 3,236,005 _RS15430 BWI76_RS15435: BWI76_RS15435 - hypothetical protein, at 3,236,108 to 3,236,371 _RS15435 BWI76_RS15440: BWI76_RS15440 - hypothetical protein, at 3,236,397 to 3,236,651 _RS15440 BWI76_RS15445: BWI76_RS15445 - hypothetical protein, at 3,237,032 to 3,237,304 _RS15445 BWI76_RS15450: BWI76_RS15450 - hypothetical protein, at 3,237,367 to 3,237,678 _RS15450 Position (kb) 3236 3237Strain fitness (log2 ratio) -1 0 1 2at 3235.139 kb on + strand, within BWI76_RS15430at 3235.291 kb on - strand, within BWI76_RS15430at 3235.320 kb on - strand, within BWI76_RS15430at 3235.872 kb on + strand, within BWI76_RS15430at 3235.880 kb on - strand, within BWI76_RS15430at 3235.942 kb on - strandat 3236.045 kb on - strandat 3236.320 kb on + strand, within BWI76_RS15435at 3236.410 kb on + strandat 3236.567 kb on - strand, within BWI76_RS15440at 3236.581 kb on + strand, within BWI76_RS15440at 3236.776 kb on - strandat 3236.863 kb on + strandat 3236.869 kb on + strandat 3236.892 kb on + strandat 3236.899 kb on + strandat 3236.904 kb on + strandat 3236.907 kb on - strandat 3236.924 kb on - strandat 3236.953 kb on + strandat 3236.961 kb on - strandat 3236.978 kb on - strandat 3237.015 kb on + strandat 3237.015 kb on + strandat 3237.015 kb on + strandat 3237.015 kb on + strandat 3237.165 kb on - strand, within BWI76_RS15445at 3237.170 kb on + strand, within BWI76_RS15445at 3237.198 kb on - strand, within BWI76_RS15445at 3237.212 kb on - strand, within BWI76_RS15445at 3237.228 kb on + strand, within BWI76_RS15445at 3237.250 kb on + strand, within BWI76_RS15445at 3237.356 kb on - strandat 3237.360 kb on + strandat 3237.368 kb on - strandat 3237.368 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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3,235,139 + BWI76_RS15430 0.20 +0.9
3,235,291 - BWI76_RS15430 0.34 -0.3
3,235,320 - BWI76_RS15430 0.37 +0.6
3,235,872 + BWI76_RS15430 0.88 -0.2
3,235,880 - BWI76_RS15430 0.88 -0.2
3,235,942 - +0.1
3,236,045 - +0.7
3,236,320 + BWI76_RS15435 0.80 -0.8
3,236,410 + +0.2
3,236,567 - BWI76_RS15440 0.67 +0.1
3,236,581 + BWI76_RS15440 0.72 -0.7
3,236,776 - +1.8
3,236,863 + -0.4
3,236,869 + -0.4
3,236,892 + -0.2
3,236,899 + -0.4
3,236,904 + +1.0
3,236,907 - -0.0
3,236,924 - +0.8
3,236,953 + +0.2
3,236,961 - +0.8
3,236,978 - -1.5
3,237,015 + +0.2
3,237,015 + +1.1
3,237,015 + +0.0
3,237,015 + +0.2
3,237,165 - BWI76_RS15445 0.49 -0.8
3,237,170 + BWI76_RS15445 0.51 -0.2
3,237,198 - BWI76_RS15445 0.61 +0.5
3,237,212 - BWI76_RS15445 0.66 +0.3
3,237,228 + BWI76_RS15445 0.72 +1.1
3,237,250 + BWI76_RS15445 0.80 +0.4
3,237,356 - -1.1
3,237,360 + +0.8
3,237,368 - +0.1
3,237,368 - -0.6

Or see this region's nucleotide sequence