Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15430 and BWI76_RS15435 are separated by 102 nucleotides BWI76_RS15435 and BWI76_RS15440 are separated by 25 nucleotides BWI76_RS15440 and BWI76_RS15445 are separated by 380 nucleotides BWI76_RS15445 and BWI76_RS15450 are separated by 62 nucleotides
BWI76_RS15430: BWI76_RS15430 - hypothetical protein, at 3,234,917 to 3,236,005
_RS15430
BWI76_RS15435: BWI76_RS15435 - hypothetical protein, at 3,236,108 to 3,236,371
_RS15435
BWI76_RS15440: BWI76_RS15440 - hypothetical protein, at 3,236,397 to 3,236,651
_RS15440
BWI76_RS15445: BWI76_RS15445 - hypothetical protein, at 3,237,032 to 3,237,304
_RS15445
BWI76_RS15450: BWI76_RS15450 - hypothetical protein, at 3,237,367 to 3,237,678
_RS15450
Position (kb)
3236
3237 Strain fitness (log2 ratio)
-1
0
1
2 at 3235.139 kb on + strand, within BWI76_RS15430 at 3235.291 kb on - strand, within BWI76_RS15430 at 3235.320 kb on - strand, within BWI76_RS15430 at 3235.872 kb on + strand, within BWI76_RS15430 at 3235.880 kb on - strand, within BWI76_RS15430 at 3235.942 kb on - strand at 3236.045 kb on - strand at 3236.320 kb on + strand, within BWI76_RS15435 at 3236.410 kb on + strand at 3236.567 kb on - strand, within BWI76_RS15440 at 3236.581 kb on + strand, within BWI76_RS15440 at 3236.776 kb on - strand at 3236.863 kb on + strand at 3236.869 kb on + strand at 3236.892 kb on + strand at 3236.899 kb on + strand at 3236.904 kb on + strand at 3236.907 kb on - strand at 3236.924 kb on - strand at 3236.953 kb on + strand at 3236.961 kb on - strand at 3236.978 kb on - strand at 3237.015 kb on + strand at 3237.015 kb on + strand at 3237.015 kb on + strand at 3237.015 kb on + strand at 3237.165 kb on - strand, within BWI76_RS15445 at 3237.170 kb on + strand, within BWI76_RS15445 at 3237.198 kb on - strand, within BWI76_RS15445 at 3237.212 kb on - strand, within BWI76_RS15445 at 3237.228 kb on + strand, within BWI76_RS15445 at 3237.250 kb on + strand, within BWI76_RS15445 at 3237.356 kb on - strand at 3237.360 kb on + strand at 3237.368 kb on - strand at 3237.368 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,235,139 + BWI76_RS15430 0.20 +0.9 3,235,291 - BWI76_RS15430 0.34 -0.3 3,235,320 - BWI76_RS15430 0.37 +0.6 3,235,872 + BWI76_RS15430 0.88 -0.2 3,235,880 - BWI76_RS15430 0.88 -0.2 3,235,942 - +0.1 3,236,045 - +0.7 3,236,320 + BWI76_RS15435 0.80 -0.8 3,236,410 + +0.2 3,236,567 - BWI76_RS15440 0.67 +0.1 3,236,581 + BWI76_RS15440 0.72 -0.7 3,236,776 - +1.8 3,236,863 + -0.4 3,236,869 + -0.4 3,236,892 + -0.2 3,236,899 + -0.4 3,236,904 + +1.0 3,236,907 - -0.0 3,236,924 - +0.8 3,236,953 + +0.2 3,236,961 - +0.8 3,236,978 - -1.5 3,237,015 + +0.2 3,237,015 + +1.1 3,237,015 + +0.0 3,237,015 + +0.2 3,237,165 - BWI76_RS15445 0.49 -0.8 3,237,170 + BWI76_RS15445 0.51 -0.2 3,237,198 - BWI76_RS15445 0.61 +0.5 3,237,212 - BWI76_RS15445 0.66 +0.3 3,237,228 + BWI76_RS15445 0.72 +1.1 3,237,250 + BWI76_RS15445 0.80 +0.4 3,237,356 - -1.1 3,237,360 + +0.8 3,237,368 - +0.1 3,237,368 - -0.6
Or see this region's nucleotide sequence