Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15280 and BWI76_RS15285 are separated by 73 nucleotides BWI76_RS15285 and BWI76_RS15290 are separated by 261 nucleotides BWI76_RS15290 and BWI76_RS15295 are separated by 17 nucleotides
BWI76_RS15280: BWI76_RS15280 - sugar transporter, at 3,202,034 to 3,203,233
_RS15280
BWI76_RS15285: BWI76_RS15285 - stress protection protein MarC, at 3,203,307 to 3,203,975
_RS15285
BWI76_RS15290: BWI76_RS15290 - transcriptional regulator, at 3,204,237 to 3,204,671
_RS15290
BWI76_RS15295: BWI76_RS15295 - MDR efflux pump AcrAB transcriptional activator MarA, at 3,204,689 to 3,205,069
_RS15295
Position (kb) 3203
3204 Strain fitness (log2 ratio) -1
0
1 at 3202.605 kb on - strand, within BWI76_RS15280 at 3202.883 kb on + strand, within BWI76_RS15280 at 3203.038 kb on + strand, within BWI76_RS15280 at 3203.159 kb on + strand at 3203.446 kb on - strand, within BWI76_RS15285 at 3203.473 kb on - strand, within BWI76_RS15285 at 3203.478 kb on - strand, within BWI76_RS15285 at 3203.863 kb on + strand, within BWI76_RS15285 at 3203.942 kb on + strand at 3203.950 kb on - strand at 3204.060 kb on - strand at 3204.104 kb on + strand at 3204.104 kb on + strand at 3204.122 kb on - strand at 3204.393 kb on + strand, within BWI76_RS15290 at 3204.632 kb on + strand at 3204.875 kb on - strand, within BWI76_RS15295 at 3204.875 kb on - strand, within BWI76_RS15295 at 3204.917 kb on + strand, within BWI76_RS15295 at 3204.918 kb on + strand, within BWI76_RS15295 at 3204.926 kb on - strand, within BWI76_RS15295
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,202,605 - BWI76_RS15280 0.48 -0.3 3,202,883 + BWI76_RS15280 0.71 +0.2 3,203,038 + BWI76_RS15280 0.84 +0.0 3,203,159 + -0.1 3,203,446 - BWI76_RS15285 0.21 +1.2 3,203,473 - BWI76_RS15285 0.25 +0.4 3,203,478 - BWI76_RS15285 0.26 +1.1 3,203,863 + BWI76_RS15285 0.83 -0.1 3,203,942 + +0.4 3,203,950 - +1.2 3,204,060 - +0.4 3,204,104 + +0.7 3,204,104 + -0.0 3,204,122 - -0.2 3,204,393 + BWI76_RS15290 0.36 +0.8 3,204,632 + -0.4 3,204,875 - BWI76_RS15295 0.49 -0.1 3,204,875 - BWI76_RS15295 0.49 +0.4 3,204,917 + BWI76_RS15295 0.60 -0.9 3,204,918 + BWI76_RS15295 0.60 -0.2 3,204,926 - BWI76_RS15295 0.62 +0.4
Or see this region's nucleotide sequence