Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14915

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14910 and BWI76_RS14915 are separated by 890 nucleotidesBWI76_RS14915 and BWI76_RS14920 are separated by 427 nucleotides BWI76_RS14910: BWI76_RS14910 - phosphoporin PhoE, at 3,124,493 to 3,125,578 _RS14910 BWI76_RS14915: BWI76_RS14915 - hypothetical protein, at 3,126,469 to 3,126,975 _RS14915 BWI76_RS14920: BWI76_RS14920 - ABC transporter permease, at 3,127,403 to 3,128,410 _RS14920 Position (kb) 3126 3127Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3125.509 kb on + strandat 3125.509 kb on - strandat 3125.509 kb on - strandat 3125.509 kb on - strandat 3125.509 kb on - strandat 3125.517 kb on - strandat 3125.517 kb on - strandat 3125.517 kb on - strandat 3125.524 kb on + strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.550 kb on - strandat 3125.632 kb on - strandat 3125.632 kb on - strandat 3125.632 kb on - strandat 3125.636 kb on + strandat 3125.644 kb on - strandat 3125.644 kb on - strandat 3125.788 kb on - strandat 3126.058 kb on + strandat 3126.101 kb on + strandat 3126.104 kb on + strandat 3126.134 kb on + strandat 3126.155 kb on + strandat 3126.166 kb on + strandat 3126.166 kb on + strandat 3126.173 kb on + strandat 3126.173 kb on + strandat 3126.173 kb on + strandat 3126.190 kb on + strandat 3126.201 kb on + strandat 3126.229 kb on + strandat 3126.239 kb on + strandat 3126.244 kb on + strandat 3126.247 kb on + strandat 3126.255 kb on - strandat 3126.271 kb on + strandat 3126.271 kb on + strandat 3126.279 kb on - strandat 3126.279 kb on - strandat 3126.279 kb on - strandat 3126.279 kb on - strandat 3126.332 kb on + strandat 3126.334 kb on - strandat 3126.337 kb on + strandat 3126.337 kb on + strandat 3126.342 kb on + strandat 3126.344 kb on + strandat 3126.351 kb on + strandat 3126.352 kb on - strandat 3126.367 kb on + strandat 3126.456 kb on - strandat 3126.456 kb on - strandat 3126.583 kb on + strand, within BWI76_RS14915at 3126.591 kb on - strandat 3126.615 kb on - strand, within BWI76_RS14915at 3126.711 kb on - strandat 3126.713 kb on - strand, within BWI76_RS14915at 3126.877 kb on - strand, within BWI76_RS14915at 3126.882 kb on - strand, within BWI76_RS14915at 3126.891 kb on - strand, within BWI76_RS14915at 3126.983 kb on - strandat 3126.994 kb on - strandat 3127.086 kb on + strandat 3127.153 kb on - strandat 3127.155 kb on + strandat 3127.368 kb on + strandat 3127.376 kb on - strandat 3127.401 kb on + strandat 3127.426 kb on + strandat 3127.541 kb on - strand, within BWI76_RS14920at 3127.616 kb on + strand, within BWI76_RS14920at 3127.710 kb on - strand, within BWI76_RS14920at 3127.763 kb on + strand, within BWI76_RS14920at 3127.771 kb on - strand, within BWI76_RS14920at 3127.777 kb on - strand, within BWI76_RS14920at 3127.856 kb on + strand, within BWI76_RS14920

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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3,125,509 + +0.2
3,125,509 - -0.7
3,125,509 - +0.1
3,125,509 - -0.8
3,125,509 - -0.5
3,125,517 - -0.1
3,125,517 - -2.2
3,125,517 - -0.2
3,125,524 + +1.2
3,125,550 - +3.4
3,125,550 - +0.9
3,125,550 - -1.1
3,125,550 - -0.8
3,125,550 - -0.2
3,125,550 - +0.5
3,125,550 - +1.3
3,125,550 - +0.9
3,125,632 - +1.0
3,125,632 - +0.7
3,125,632 - +3.8
3,125,636 + +1.8
3,125,644 - -1.1
3,125,644 - +1.4
3,125,788 - -1.9
3,126,058 + +1.1
3,126,101 + -0.4
3,126,104 + +0.0
3,126,134 + -0.2
3,126,155 + +0.8
3,126,166 + +0.2
3,126,166 + -2.0
3,126,173 + +1.1
3,126,173 + -0.6
3,126,173 + -0.6
3,126,190 + +0.2
3,126,201 + +0.9
3,126,229 + +0.8
3,126,239 + +0.4
3,126,244 + -0.2
3,126,247 + -0.5
3,126,255 - -0.8
3,126,271 + +0.2
3,126,271 + +0.4
3,126,279 - -0.9
3,126,279 - +0.5
3,126,279 - +0.1
3,126,279 - +0.6
3,126,332 + +0.2
3,126,334 - +2.8
3,126,337 + +0.3
3,126,337 + +1.8
3,126,342 + -1.2
3,126,344 + +0.3
3,126,351 + +0.5
3,126,352 - +0.8
3,126,367 + -1.0
3,126,456 - -0.6
3,126,456 - -0.9
3,126,583 + BWI76_RS14915 0.22 -2.1
3,126,591 - +1.8
3,126,615 - BWI76_RS14915 0.29 -1.5
3,126,711 - -0.2
3,126,713 - BWI76_RS14915 0.48 -1.1
3,126,877 - BWI76_RS14915 0.80 -2.6
3,126,882 - BWI76_RS14915 0.81 -0.2
3,126,891 - BWI76_RS14915 0.83 +0.3
3,126,983 - +0.0
3,126,994 - -1.4
3,127,086 + +1.5
3,127,153 - -0.5
3,127,155 + -0.8
3,127,368 + -0.6
3,127,376 - +1.5
3,127,401 + -0.1
3,127,426 + +0.1
3,127,541 - BWI76_RS14920 0.14 -0.4
3,127,616 + BWI76_RS14920 0.21 +0.4
3,127,710 - BWI76_RS14920 0.30 +0.9
3,127,763 + BWI76_RS14920 0.36 +0.0
3,127,771 - BWI76_RS14920 0.37 +0.7
3,127,777 - BWI76_RS14920 0.37 +0.2
3,127,856 + BWI76_RS14920 0.45 +0.1

Or see this region's nucleotide sequence