Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11850

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11845 and BWI76_RS11850 are separated by 9 nucleotidesBWI76_RS11850 and BWI76_RS11855 are separated by 3 nucleotides BWI76_RS11845: BWI76_RS11845 - tryptophan synthase subunit beta, at 2,489,769 to 2,490,962 _RS11845 BWI76_RS11850: BWI76_RS11850 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase, at 2,490,972 to 2,492,330 _RS11850 BWI76_RS11855: BWI76_RS11855 - bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase, at 2,492,334 to 2,493,929 _RS11855 Position (kb) 2490 2491 2492 2493Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2490.020 kb on - strand, within BWI76_RS11845at 2490.126 kb on + strand, within BWI76_RS11845at 2490.913 kb on + strandat 2490.932 kb on + strandat 2490.937 kb on + strandat 2490.955 kb on + strandat 2491.046 kb on - strandat 2491.136 kb on + strand, within BWI76_RS11850at 2491.136 kb on + strand, within BWI76_RS11850at 2491.324 kb on - strand, within BWI76_RS11850at 2491.426 kb on - strand, within BWI76_RS11850at 2491.542 kb on + strand, within BWI76_RS11850at 2491.601 kb on - strand, within BWI76_RS11850at 2491.672 kb on - strand, within BWI76_RS11850at 2491.712 kb on - strand, within BWI76_RS11850at 2491.732 kb on - strand, within BWI76_RS11850at 2491.855 kb on + strand, within BWI76_RS11850at 2492.072 kb on + strand, within BWI76_RS11850at 2492.072 kb on + strand, within BWI76_RS11850at 2492.080 kb on - strand, within BWI76_RS11850at 2492.139 kb on + strand, within BWI76_RS11850at 2492.341 kb on + strandat 2492.349 kb on - strandat 2492.364 kb on + strandat 2492.372 kb on - strandat 2492.372 kb on - strandat 2492.539 kb on - strand, within BWI76_RS11855at 2492.739 kb on - strand, within BWI76_RS11855at 2493.033 kb on + strand, within BWI76_RS11855at 2493.262 kb on + strand, within BWI76_RS11855

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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2,490,020 - BWI76_RS11845 0.21 -1.2
2,490,126 + BWI76_RS11845 0.30 -3.3
2,490,913 + -3.7
2,490,932 + -5.7
2,490,937 + -5.7
2,490,955 + -2.3
2,491,046 - -3.8
2,491,136 + BWI76_RS11850 0.12 -6.3
2,491,136 + BWI76_RS11850 0.12 -5.0
2,491,324 - BWI76_RS11850 0.26 -3.2
2,491,426 - BWI76_RS11850 0.33 -2.8
2,491,542 + BWI76_RS11850 0.42 -5.0
2,491,601 - BWI76_RS11850 0.46 -2.1
2,491,672 - BWI76_RS11850 0.52 -4.8
2,491,712 - BWI76_RS11850 0.54 -1.8
2,491,732 - BWI76_RS11850 0.56 -2.3
2,491,855 + BWI76_RS11850 0.65 -3.4
2,492,072 + BWI76_RS11850 0.81 -5.0
2,492,072 + BWI76_RS11850 0.81 -4.2
2,492,080 - BWI76_RS11850 0.82 -4.0
2,492,139 + BWI76_RS11850 0.86 -3.0
2,492,341 + -4.5
2,492,349 - +0.4
2,492,364 + -0.7
2,492,372 - -4.0
2,492,372 - -4.3
2,492,539 - BWI76_RS11855 0.13 -2.4
2,492,739 - BWI76_RS11855 0.25 -4.1
2,493,033 + BWI76_RS11855 0.44 -3.6
2,493,262 + BWI76_RS11855 0.58 -3.4

Or see this region's nucleotide sequence