Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11835 and BWI76_RS11840 are separated by 32 nucleotides BWI76_RS11840 and BWI76_RS11845 overlap by 1 nucleotides BWI76_RS11845 and BWI76_RS11850 are separated by 9 nucleotides
BWI76_RS11835: BWI76_RS11835 - putative regulatory protein MarR, at 2,488,472 to 2,488,927
_RS11835
BWI76_RS11840: BWI76_RS11840 - tryptophan synthase subunit alpha, at 2,488,960 to 2,489,769
_RS11840
BWI76_RS11845: BWI76_RS11845 - tryptophan synthase subunit beta, at 2,489,769 to 2,490,962
_RS11845
BWI76_RS11850: BWI76_RS11850 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase, at 2,490,972 to 2,492,330
_RS11850
Position (kb)
2489
2490
2491 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 2488.873 kb on - strand, within BWI76_RS11835 at 2489.110 kb on + strand, within BWI76_RS11840 at 2489.118 kb on - strand, within BWI76_RS11840 at 2489.335 kb on - strand, within BWI76_RS11840 at 2489.732 kb on + strand at 2489.811 kb on + strand at 2490.020 kb on - strand, within BWI76_RS11845 at 2490.126 kb on + strand, within BWI76_RS11845 at 2490.913 kb on + strand at 2490.932 kb on + strand at 2490.937 kb on + strand at 2490.955 kb on + strand at 2491.046 kb on - strand at 2491.136 kb on + strand, within BWI76_RS11850 at 2491.136 kb on + strand, within BWI76_RS11850 at 2491.324 kb on - strand, within BWI76_RS11850 at 2491.426 kb on - strand, within BWI76_RS11850 at 2491.542 kb on + strand, within BWI76_RS11850 at 2491.601 kb on - strand, within BWI76_RS11850 at 2491.672 kb on - strand, within BWI76_RS11850 at 2491.712 kb on - strand, within BWI76_RS11850 at 2491.732 kb on - strand, within BWI76_RS11850 at 2491.855 kb on + strand, within BWI76_RS11850
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,488,873 - BWI76_RS11835 0.88 -0.3 2,489,110 + BWI76_RS11840 0.19 -1.8 2,489,118 - BWI76_RS11840 0.20 -6.8 2,489,335 - BWI76_RS11840 0.46 -1.2 2,489,732 + -4.7 2,489,811 + -4.5 2,490,020 - BWI76_RS11845 0.21 -1.2 2,490,126 + BWI76_RS11845 0.30 -3.3 2,490,913 + -3.7 2,490,932 + -5.7 2,490,937 + -5.7 2,490,955 + -2.3 2,491,046 - -3.8 2,491,136 + BWI76_RS11850 0.12 -6.3 2,491,136 + BWI76_RS11850 0.12 -5.0 2,491,324 - BWI76_RS11850 0.26 -3.2 2,491,426 - BWI76_RS11850 0.33 -2.8 2,491,542 + BWI76_RS11850 0.42 -5.0 2,491,601 - BWI76_RS11850 0.46 -2.1 2,491,672 - BWI76_RS11850 0.52 -4.8 2,491,712 - BWI76_RS11850 0.54 -1.8 2,491,732 - BWI76_RS11850 0.56 -2.3 2,491,855 + BWI76_RS11850 0.65 -3.4
Or see this region's nucleotide sequence