Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10835

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10830 and BWI76_RS10835 are separated by 50 nucleotidesBWI76_RS10835 and BWI76_RS10840 are separated by 155 nucleotides BWI76_RS10830: BWI76_RS10830 - phosphate starvation-inducible protein PhoH, at 2,288,942 to 2,290,006 _RS10830 BWI76_RS10835: BWI76_RS10835 - hypothetical protein, at 2,290,057 to 2,290,350 _RS10835 BWI76_RS10840: BWI76_RS10840 - membrane protein, at 2,290,506 to 2,291,294 _RS10840 Position (kb) 2290 2291Strain fitness (log2 ratio) -1 0 1 2at 2289.081 kb on - strand, within BWI76_RS10830at 2289.090 kb on + strand, within BWI76_RS10830at 2289.189 kb on + strand, within BWI76_RS10830at 2289.234 kb on - strand, within BWI76_RS10830at 2289.537 kb on - strand, within BWI76_RS10830at 2289.668 kb on + strand, within BWI76_RS10830at 2289.708 kb on - strand, within BWI76_RS10830at 2289.997 kb on + strandat 2290.057 kb on + strandat 2290.065 kb on - strandat 2290.082 kb on - strandat 2290.159 kb on + strand, within BWI76_RS10835at 2290.566 kb on + strandat 2290.618 kb on - strand, within BWI76_RS10840at 2290.642 kb on + strand, within BWI76_RS10840at 2290.642 kb on + strand, within BWI76_RS10840at 2290.652 kb on + strand, within BWI76_RS10840at 2290.846 kb on + strand, within BWI76_RS10840at 2291.271 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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2,289,081 - BWI76_RS10830 0.13 +0.6
2,289,090 + BWI76_RS10830 0.14 -0.5
2,289,189 + BWI76_RS10830 0.23 -0.1
2,289,234 - BWI76_RS10830 0.27 -0.1
2,289,537 - BWI76_RS10830 0.56 +0.2
2,289,668 + BWI76_RS10830 0.68 +0.2
2,289,708 - BWI76_RS10830 0.72 -0.5
2,289,997 + -0.5
2,290,057 + +0.1
2,290,065 - +0.1
2,290,082 - +1.9
2,290,159 + BWI76_RS10835 0.35 -1.0
2,290,566 + -0.6
2,290,618 - BWI76_RS10840 0.14 -0.2
2,290,642 + BWI76_RS10840 0.17 -0.3
2,290,642 + BWI76_RS10840 0.17 -0.8
2,290,652 + BWI76_RS10840 0.19 +0.7
2,290,846 + BWI76_RS10840 0.43 +0.0
2,291,271 - -0.3

Or see this region's nucleotide sequence