Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09760

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09755 and BWI76_RS09760 are separated by 72 nucleotidesBWI76_RS09760 and BWI76_RS09765 are separated by 147 nucleotidesBWI76_RS09765 and BWI76_RS09770 overlap by 54 nucleotides BWI76_RS09755: BWI76_RS09755 - phosphoserine transaminase, at 2,046,155 to 2,047,243 _RS09755 BWI76_RS09760: BWI76_RS09760 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,047,316 to 2,048,599 _RS09760 BWI76_RS09765: BWI76_RS09765 - metalloprotease, at 2,048,747 to 2,049,514 _RS09765 BWI76_RS09770: BWI76_RS09770 - hypothetical protein, at 2,049,461 to 2,049,753 _RS09770 Position (kb) 2047 2048 2049Strain fitness (log2 ratio) -7 -6 -5 -4 -3 -2 -1 0 1at 2046.342 kb on - strand, within BWI76_RS09755at 2046.471 kb on + strand, within BWI76_RS09755at 2046.808 kb on - strand, within BWI76_RS09755at 2046.851 kb on + strand, within BWI76_RS09755at 2046.910 kb on - strand, within BWI76_RS09755at 2046.910 kb on - strand, within BWI76_RS09755at 2046.931 kb on + strand, within BWI76_RS09755at 2046.972 kb on - strand, within BWI76_RS09755at 2047.428 kb on + strandat 2048.002 kb on + strand, within BWI76_RS09760at 2048.002 kb on + strand, within BWI76_RS09760at 2048.002 kb on + strand, within BWI76_RS09760at 2048.119 kb on - strand, within BWI76_RS09760at 2048.366 kb on + strand, within BWI76_RS09760at 2048.434 kb on + strand, within BWI76_RS09760at 2048.593 kb on + strandat 2048.593 kb on + strandat 2048.837 kb on - strand, within BWI76_RS09765at 2049.152 kb on - strand, within BWI76_RS09765

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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2,046,342 - BWI76_RS09755 0.17 -2.6
2,046,471 + BWI76_RS09755 0.29 -0.7
2,046,808 - BWI76_RS09755 0.60 -6.0
2,046,851 + BWI76_RS09755 0.64 -2.8
2,046,910 - BWI76_RS09755 0.69 -5.1
2,046,910 - BWI76_RS09755 0.69 -4.3
2,046,931 + BWI76_RS09755 0.71 -7.4
2,046,972 - BWI76_RS09755 0.75 -1.3
2,047,428 + -3.1
2,048,002 + BWI76_RS09760 0.53 -2.2
2,048,002 + BWI76_RS09760 0.53 -3.7
2,048,002 + BWI76_RS09760 0.53 -5.8
2,048,119 - BWI76_RS09760 0.63 -3.6
2,048,366 + BWI76_RS09760 0.82 -4.0
2,048,434 + BWI76_RS09760 0.87 -5.6
2,048,593 + -0.2
2,048,593 + +0.3
2,048,837 - BWI76_RS09765 0.12 -0.2
2,049,152 - BWI76_RS09765 0.53 -0.1

Or see this region's nucleotide sequence