Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09745 and BWI76_RS09750 are separated by 114 nucleotides BWI76_RS09750 and BWI76_RS09755 are separated by 186 nucleotides BWI76_RS09755 and BWI76_RS09760 are separated by 72 nucleotides
BWI76_RS09745: BWI76_RS09745 - 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO, at 2,043,401 to 2,045,161
_RS09745
BWI76_RS09750: BWI76_RS09750 - DUF421 domain-containing protein, at 2,045,276 to 2,045,968
_RS09750
BWI76_RS09755: BWI76_RS09755 - phosphoserine transaminase, at 2,046,155 to 2,047,243
_RS09755
BWI76_RS09760: BWI76_RS09760 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,047,316 to 2,048,599
_RS09760
Position (kb)
2046
2047
2048 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 2045.259 kb on - strand at 2045.259 kb on - strand at 2045.337 kb on + strand at 2045.347 kb on + strand, within BWI76_RS09750 at 2045.354 kb on + strand, within BWI76_RS09750 at 2045.361 kb on - strand, within BWI76_RS09750 at 2045.433 kb on - strand, within BWI76_RS09750 at 2045.490 kb on + strand, within BWI76_RS09750 at 2045.778 kb on - strand, within BWI76_RS09750 at 2045.796 kb on + strand, within BWI76_RS09750 at 2045.934 kb on + strand at 2045.999 kb on - strand at 2046.054 kb on - strand at 2046.172 kb on + strand at 2046.342 kb on - strand, within BWI76_RS09755 at 2046.471 kb on + strand, within BWI76_RS09755 at 2046.808 kb on - strand, within BWI76_RS09755 at 2046.851 kb on + strand, within BWI76_RS09755 at 2046.910 kb on - strand, within BWI76_RS09755 at 2046.910 kb on - strand, within BWI76_RS09755 at 2046.931 kb on + strand, within BWI76_RS09755 at 2046.972 kb on - strand, within BWI76_RS09755 at 2047.428 kb on + strand at 2048.002 kb on + strand, within BWI76_RS09760 at 2048.002 kb on + strand, within BWI76_RS09760 at 2048.002 kb on + strand, within BWI76_RS09760 at 2048.119 kb on - strand, within BWI76_RS09760
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,045,259 - +0.3 2,045,259 - +1.7 2,045,337 + -0.3 2,045,347 + BWI76_RS09750 0.10 -0.5 2,045,354 + BWI76_RS09750 0.11 -0.7 2,045,361 - BWI76_RS09750 0.12 +0.6 2,045,433 - BWI76_RS09750 0.23 -0.7 2,045,490 + BWI76_RS09750 0.31 -0.5 2,045,778 - BWI76_RS09750 0.72 -0.7 2,045,796 + BWI76_RS09750 0.75 +0.3 2,045,934 + +0.4 2,045,999 - +0.0 2,046,054 - +0.5 2,046,172 + -5.4 2,046,342 - BWI76_RS09755 0.17 -2.6 2,046,471 + BWI76_RS09755 0.29 -0.7 2,046,808 - BWI76_RS09755 0.60 -6.0 2,046,851 + BWI76_RS09755 0.64 -2.8 2,046,910 - BWI76_RS09755 0.69 -5.1 2,046,910 - BWI76_RS09755 0.69 -4.3 2,046,931 + BWI76_RS09755 0.71 -7.4 2,046,972 - BWI76_RS09755 0.75 -1.3 2,047,428 + -3.1 2,048,002 + BWI76_RS09760 0.53 -2.2 2,048,002 + BWI76_RS09760 0.53 -3.7 2,048,002 + BWI76_RS09760 0.53 -5.8 2,048,119 - BWI76_RS09760 0.63 -3.6
Or see this region's nucleotide sequence