Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09660

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09650 and BWI76_RS09655 overlap by 72 nucleotidesBWI76_RS09655 and BWI76_RS09660 are separated by 135 nucleotidesBWI76_RS09660 and BWI76_RS09665 are separated by 121 nucleotidesBWI76_RS09665 and BWI76_RS09670 are separated by 8 nucleotides BWI76_RS09650: BWI76_RS09650 - hypothetical protein, at 2,020,148 to 2,020,347 _RS09650 BWI76_RS09655: BWI76_RS09655 - leucine-responsive regulatory protein, at 2,020,276 to 2,020,770 _RS09655 BWI76_RS09660: BWI76_RS09660 - DNA translocase FtsK, at 2,020,906 to 2,025,024 _RS09660 BWI76_RS09665: BWI76_RS09665 - outer membrane lipoprotein carrier protein LolA, at 2,025,146 to 2,025,757 _RS09665 BWI76_RS09670: BWI76_RS09670 - recombination factor protein RarA, at 2,025,766 to 2,027,109 _RS09670 Position (kb) 2020 2021 2022 2023 2024 2025 2026Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2019.943 kb on + strandat 2020.109 kb on + strandat 2020.122 kb on - strandat 2020.168 kb on - strand, within BWI76_RS09650at 2020.171 kb on + strand, within BWI76_RS09650at 2020.171 kb on + strand, within BWI76_RS09650at 2020.179 kb on - strand, within BWI76_RS09650at 2020.189 kb on - strand, within BWI76_RS09650at 2020.204 kb on - strand, within BWI76_RS09650at 2020.204 kb on - strand, within BWI76_RS09650at 2020.204 kb on - strand, within BWI76_RS09650at 2020.211 kb on + strand, within BWI76_RS09650at 2020.243 kb on + strand, within BWI76_RS09650at 2020.254 kb on + strand, within BWI76_RS09650at 2020.408 kb on + strand, within BWI76_RS09655at 2020.452 kb on + strand, within BWI76_RS09655at 2020.460 kb on - strand, within BWI76_RS09655at 2020.465 kb on - strand, within BWI76_RS09655at 2020.481 kb on + strand, within BWI76_RS09655at 2020.707 kb on - strand, within BWI76_RS09655at 2021.945 kb on - strand, within BWI76_RS09660at 2022.127 kb on + strand, within BWI76_RS09660at 2022.820 kb on - strand, within BWI76_RS09660at 2024.608 kb on - strand, within BWI76_RS09660at 2025.846 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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2,019,943 + -2.7
2,020,109 + +1.0
2,020,122 - -1.1
2,020,168 - BWI76_RS09650 0.10 +0.8
2,020,171 + BWI76_RS09650 0.12 +1.0
2,020,171 + BWI76_RS09650 0.12 +0.9
2,020,179 - BWI76_RS09650 0.15 +1.8
2,020,189 - BWI76_RS09650 0.20 +0.9
2,020,204 - BWI76_RS09650 0.28 +1.0
2,020,204 - BWI76_RS09650 0.28 +0.0
2,020,204 - BWI76_RS09650 0.28 +0.6
2,020,211 + BWI76_RS09650 0.32 +1.0
2,020,243 + BWI76_RS09650 0.47 +1.3
2,020,254 + BWI76_RS09650 0.53 +1.9
2,020,408 + BWI76_RS09655 0.27 +1.4
2,020,452 + BWI76_RS09655 0.36 +1.1
2,020,460 - BWI76_RS09655 0.37 +1.1
2,020,465 - BWI76_RS09655 0.38 +3.0
2,020,481 + BWI76_RS09655 0.41 +1.5
2,020,707 - BWI76_RS09655 0.87 +1.9
2,021,945 - BWI76_RS09660 0.25 -2.2
2,022,127 + BWI76_RS09660 0.30 -1.3
2,022,820 - BWI76_RS09660 0.46 -2.3
2,024,608 - BWI76_RS09660 0.90 -1.5
2,025,846 + -0.2

Or see this region's nucleotide sequence