Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09650 and BWI76_RS09655 overlap by 72 nucleotides BWI76_RS09655 and BWI76_RS09660 are separated by 135 nucleotides BWI76_RS09660 and BWI76_RS09665 are separated by 121 nucleotides BWI76_RS09665 and BWI76_RS09670 are separated by 8 nucleotides
BWI76_RS09650: BWI76_RS09650 - hypothetical protein, at 2,020,148 to 2,020,347
_RS09650
BWI76_RS09655: BWI76_RS09655 - leucine-responsive regulatory protein, at 2,020,276 to 2,020,770
_RS09655
BWI76_RS09660: BWI76_RS09660 - DNA translocase FtsK, at 2,020,906 to 2,025,024
_RS09660
BWI76_RS09665: BWI76_RS09665 - outer membrane lipoprotein carrier protein LolA, at 2,025,146 to 2,025,757
_RS09665
BWI76_RS09670: BWI76_RS09670 - recombination factor protein RarA, at 2,025,766 to 2,027,109
_RS09670
Position (kb)
2020
2021
2022
2023
2024
2025
2026 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2019.943 kb on + strand at 2020.109 kb on + strand at 2020.122 kb on - strand at 2020.168 kb on - strand, within BWI76_RS09650 at 2020.171 kb on + strand, within BWI76_RS09650 at 2020.171 kb on + strand, within BWI76_RS09650 at 2020.179 kb on - strand, within BWI76_RS09650 at 2020.189 kb on - strand, within BWI76_RS09650 at 2020.204 kb on - strand, within BWI76_RS09650 at 2020.204 kb on - strand, within BWI76_RS09650 at 2020.204 kb on - strand, within BWI76_RS09650 at 2020.211 kb on + strand, within BWI76_RS09650 at 2020.243 kb on + strand, within BWI76_RS09650 at 2020.254 kb on + strand, within BWI76_RS09650 at 2020.408 kb on + strand, within BWI76_RS09655 at 2020.452 kb on + strand, within BWI76_RS09655 at 2020.460 kb on - strand, within BWI76_RS09655 at 2020.465 kb on - strand, within BWI76_RS09655 at 2020.481 kb on + strand, within BWI76_RS09655 at 2020.707 kb on - strand, within BWI76_RS09655 at 2021.945 kb on - strand, within BWI76_RS09660 at 2022.127 kb on + strand, within BWI76_RS09660 at 2022.820 kb on - strand, within BWI76_RS09660 at 2024.608 kb on - strand, within BWI76_RS09660 at 2025.846 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,019,943 + -2.7 2,020,109 + +1.0 2,020,122 - -1.1 2,020,168 - BWI76_RS09650 0.10 +0.8 2,020,171 + BWI76_RS09650 0.12 +1.0 2,020,171 + BWI76_RS09650 0.12 +0.9 2,020,179 - BWI76_RS09650 0.15 +1.8 2,020,189 - BWI76_RS09650 0.20 +0.9 2,020,204 - BWI76_RS09650 0.28 +1.0 2,020,204 - BWI76_RS09650 0.28 +0.0 2,020,204 - BWI76_RS09650 0.28 +0.6 2,020,211 + BWI76_RS09650 0.32 +1.0 2,020,243 + BWI76_RS09650 0.47 +1.3 2,020,254 + BWI76_RS09650 0.53 +1.9 2,020,408 + BWI76_RS09655 0.27 +1.4 2,020,452 + BWI76_RS09655 0.36 +1.1 2,020,460 - BWI76_RS09655 0.37 +1.1 2,020,465 - BWI76_RS09655 0.38 +3.0 2,020,481 + BWI76_RS09655 0.41 +1.5 2,020,707 - BWI76_RS09655 0.87 +1.9 2,021,945 - BWI76_RS09660 0.25 -2.2 2,022,127 + BWI76_RS09660 0.30 -1.3 2,022,820 - BWI76_RS09660 0.46 -2.3 2,024,608 - BWI76_RS09660 0.90 -1.5 2,025,846 + -0.2
Or see this region's nucleotide sequence