Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09640 and BWI76_RS09645 are separated by 114 nucleotides BWI76_RS09645 and BWI76_RS09650 are separated by 403 nucleotides BWI76_RS09650 and BWI76_RS09655 overlap by 72 nucleotides
BWI76_RS09640: BWI76_RS09640 - cysteine/glutathione ABC transporter permease/ATP-binding protein CydD, at 2,016,895 to 2,018,661
_RS09640
BWI76_RS09645: BWI76_RS09645 - thioredoxin-disulfide reductase, at 2,018,776 to 2,019,744
_RS09645
BWI76_RS09650: BWI76_RS09650 - hypothetical protein, at 2,020,148 to 2,020,347
_RS09650
BWI76_RS09655: BWI76_RS09655 - leucine-responsive regulatory protein, at 2,020,276 to 2,020,770
_RS09655
Position (kb)
2018
2019
2020 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2017.817 kb on - strand, within BWI76_RS09640 at 2018.358 kb on - strand, within BWI76_RS09640 at 2018.799 kb on + strand at 2019.640 kb on + strand, within BWI76_RS09645 at 2019.688 kb on + strand at 2019.943 kb on + strand at 2020.109 kb on + strand at 2020.122 kb on - strand at 2020.168 kb on - strand, within BWI76_RS09650 at 2020.171 kb on + strand, within BWI76_RS09650 at 2020.171 kb on + strand, within BWI76_RS09650 at 2020.179 kb on - strand, within BWI76_RS09650 at 2020.189 kb on - strand, within BWI76_RS09650 at 2020.204 kb on - strand, within BWI76_RS09650 at 2020.204 kb on - strand, within BWI76_RS09650 at 2020.204 kb on - strand, within BWI76_RS09650 at 2020.211 kb on + strand, within BWI76_RS09650 at 2020.243 kb on + strand, within BWI76_RS09650 at 2020.254 kb on + strand, within BWI76_RS09650 at 2020.408 kb on + strand, within BWI76_RS09655 at 2020.452 kb on + strand, within BWI76_RS09655 at 2020.460 kb on - strand, within BWI76_RS09655 at 2020.465 kb on - strand, within BWI76_RS09655 at 2020.481 kb on + strand, within BWI76_RS09655 at 2020.707 kb on - strand, within BWI76_RS09655
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,017,817 - BWI76_RS09640 0.52 -1.4 2,018,358 - BWI76_RS09640 0.83 -0.7 2,018,799 + -0.2 2,019,640 + BWI76_RS09645 0.89 -2.7 2,019,688 + -0.0 2,019,943 + -2.7 2,020,109 + +1.0 2,020,122 - -1.1 2,020,168 - BWI76_RS09650 0.10 +0.8 2,020,171 + BWI76_RS09650 0.12 +1.0 2,020,171 + BWI76_RS09650 0.12 +0.9 2,020,179 - BWI76_RS09650 0.15 +1.8 2,020,189 - BWI76_RS09650 0.20 +0.9 2,020,204 - BWI76_RS09650 0.28 +1.0 2,020,204 - BWI76_RS09650 0.28 +0.0 2,020,204 - BWI76_RS09650 0.28 +0.6 2,020,211 + BWI76_RS09650 0.32 +1.0 2,020,243 + BWI76_RS09650 0.47 +1.3 2,020,254 + BWI76_RS09650 0.53 +1.9 2,020,408 + BWI76_RS09655 0.27 +1.4 2,020,452 + BWI76_RS09655 0.36 +1.1 2,020,460 - BWI76_RS09655 0.37 +1.1 2,020,465 - BWI76_RS09655 0.38 +3.0 2,020,481 + BWI76_RS09655 0.41 +1.5 2,020,707 - BWI76_RS09655 0.87 +1.9
Or see this region's nucleotide sequence