Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08105

Experiment: L-Glutamic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08095 and BWI76_RS08100 overlap by 1 nucleotidesBWI76_RS08100 and BWI76_RS08105 overlap by 1 nucleotidesBWI76_RS08105 and BWI76_RS08110 are separated by 163 nucleotides BWI76_RS08095: BWI76_RS08095 - arginine ABC transporter ATP-binding protein, at 1,716,367 to 1,717,092 _RS08095 BWI76_RS08100: BWI76_RS08100 - glutamate/aspartate transporter permease GltK, at 1,717,092 to 1,717,766 _RS08100 BWI76_RS08105: BWI76_RS08105 - glutamate/aspartate ABC transporter permease GltJ, at 1,717,766 to 1,718,506 _RS08105 BWI76_RS08110: BWI76_RS08110 - glutamate/aspartate ABC transporter substrate-binding protein, at 1,718,670 to 1,719,581 _RS08110 Position (kb) 1717 1718 1719Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1716.779 kb on + strand, within BWI76_RS08095at 1716.780 kb on - strand, within BWI76_RS08095at 1716.787 kb on - strand, within BWI76_RS08095at 1716.787 kb on - strand, within BWI76_RS08095at 1716.787 kb on - strand, within BWI76_RS08095at 1716.839 kb on - strand, within BWI76_RS08095at 1716.927 kb on - strand, within BWI76_RS08095at 1716.976 kb on + strand, within BWI76_RS08095at 1717.097 kb on - strandat 1717.246 kb on + strand, within BWI76_RS08100at 1717.357 kb on + strand, within BWI76_RS08100at 1717.357 kb on + strand, within BWI76_RS08100at 1717.365 kb on - strand, within BWI76_RS08100at 1717.365 kb on - strand, within BWI76_RS08100at 1717.386 kb on - strand, within BWI76_RS08100at 1717.699 kb on + strandat 1717.856 kb on + strand, within BWI76_RS08105at 1717.883 kb on + strand, within BWI76_RS08105at 1717.906 kb on - strand, within BWI76_RS08105at 1718.024 kb on - strand, within BWI76_RS08105at 1718.034 kb on - strand, within BWI76_RS08105at 1718.122 kb on + strand, within BWI76_RS08105at 1718.210 kb on - strand, within BWI76_RS08105at 1718.244 kb on - strand, within BWI76_RS08105at 1718.333 kb on + strand, within BWI76_RS08105at 1718.416 kb on + strand, within BWI76_RS08105at 1718.703 kb on - strandat 1719.091 kb on - strand, within BWI76_RS08110at 1719.115 kb on + strand, within BWI76_RS08110at 1719.115 kb on + strand, within BWI76_RS08110at 1719.377 kb on + strand, within BWI76_RS08110

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (N)
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1,716,779 + BWI76_RS08095 0.57 -1.6
1,716,780 - BWI76_RS08095 0.57 -1.2
1,716,787 - BWI76_RS08095 0.58 -2.5
1,716,787 - BWI76_RS08095 0.58 -0.3
1,716,787 - BWI76_RS08095 0.58 -3.8
1,716,839 - BWI76_RS08095 0.65 -2.0
1,716,927 - BWI76_RS08095 0.77 -2.8
1,716,976 + BWI76_RS08095 0.84 -3.1
1,717,097 - -1.3
1,717,246 + BWI76_RS08100 0.23 -0.8
1,717,357 + BWI76_RS08100 0.39 -2.7
1,717,357 + BWI76_RS08100 0.39 -1.4
1,717,365 - BWI76_RS08100 0.40 -1.9
1,717,365 - BWI76_RS08100 0.40 -2.3
1,717,386 - BWI76_RS08100 0.44 -1.8
1,717,699 + -2.2
1,717,856 + BWI76_RS08105 0.12 -2.3
1,717,883 + BWI76_RS08105 0.16 -1.6
1,717,906 - BWI76_RS08105 0.19 -4.8
1,718,024 - BWI76_RS08105 0.35 -0.9
1,718,034 - BWI76_RS08105 0.36 +0.4
1,718,122 + BWI76_RS08105 0.48 -1.6
1,718,210 - BWI76_RS08105 0.60 -1.5
1,718,244 - BWI76_RS08105 0.65 -4.4
1,718,333 + BWI76_RS08105 0.77 -2.2
1,718,416 + BWI76_RS08105 0.88 -2.2
1,718,703 - -0.8
1,719,091 - BWI76_RS08110 0.46 -2.4
1,719,115 + BWI76_RS08110 0.49 -0.8
1,719,115 + BWI76_RS08110 0.49 -1.4
1,719,377 + BWI76_RS08110 0.78 -0.8

Or see this region's nucleotide sequence