Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08090 and BWI76_RS08095 are separated by 377 nucleotides BWI76_RS08095 and BWI76_RS08100 overlap by 1 nucleotides BWI76_RS08100 and BWI76_RS08105 overlap by 1 nucleotides
BWI76_RS08090: BWI76_RS08090 - ShlB-type POTRA domain/hemolysin secretion/activation protein ShlB/FhaC/HecB, at 1,714,319 to 1,715,989
_RS08090
BWI76_RS08095: BWI76_RS08095 - arginine ABC transporter ATP-binding protein, at 1,716,367 to 1,717,092
_RS08095
BWI76_RS08100: BWI76_RS08100 - glutamate/aspartate transporter permease GltK, at 1,717,092 to 1,717,766
_RS08100
BWI76_RS08105: BWI76_RS08105 - glutamate/aspartate ABC transporter permease GltJ, at 1,717,766 to 1,718,506
_RS08105
Position (kb)
1716
1717
1718 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4 at 1715.432 kb on + strand, within BWI76_RS08090 at 1715.443 kb on + strand, within BWI76_RS08090 at 1715.443 kb on + strand, within BWI76_RS08090 at 1715.451 kb on - strand at 1715.451 kb on - strand, within BWI76_RS08090 at 1715.465 kb on + strand, within BWI76_RS08090 at 1715.473 kb on - strand, within BWI76_RS08090 at 1715.473 kb on - strand, within BWI76_RS08090 at 1715.473 kb on - strand, within BWI76_RS08090 at 1715.490 kb on + strand, within BWI76_RS08090 at 1715.490 kb on + strand, within BWI76_RS08090 at 1715.498 kb on - strand, within BWI76_RS08090 at 1715.500 kb on + strand, within BWI76_RS08090 at 1715.508 kb on - strand, within BWI76_RS08090 at 1715.508 kb on - strand, within BWI76_RS08090 at 1715.508 kb on - strand, within BWI76_RS08090 at 1715.508 kb on - strand, within BWI76_RS08090 at 1715.544 kb on + strand, within BWI76_RS08090 at 1715.555 kb on + strand, within BWI76_RS08090 at 1715.555 kb on + strand, within BWI76_RS08090 at 1715.563 kb on - strand, within BWI76_RS08090 at 1715.591 kb on + strand, within BWI76_RS08090 at 1715.624 kb on + strand, within BWI76_RS08090 at 1715.624 kb on + strand, within BWI76_RS08090 at 1715.624 kb on + strand, within BWI76_RS08090 at 1715.877 kb on + strand at 1715.877 kb on + strand at 1715.877 kb on + strand at 1715.882 kb on + strand at 1715.885 kb on - strand at 1716.054 kb on + strand at 1716.058 kb on + strand at 1716.069 kb on - strand at 1716.179 kb on + strand at 1716.184 kb on + strand at 1716.184 kb on + strand at 1716.253 kb on + strand at 1716.260 kb on + strand at 1716.292 kb on - strand at 1716.339 kb on - strand at 1716.342 kb on - strand at 1716.372 kb on - strand at 1716.373 kb on - strand at 1716.373 kb on - strand at 1716.385 kb on - strand at 1716.396 kb on - strand at 1716.407 kb on + strand at 1716.407 kb on + strand at 1716.415 kb on - strand at 1716.460 kb on - strand, within BWI76_RS08095 at 1716.462 kb on + strand, within BWI76_RS08095 at 1716.530 kb on - strand, within BWI76_RS08095 at 1716.537 kb on - strand, within BWI76_RS08095 at 1716.590 kb on - strand, within BWI76_RS08095 at 1716.599 kb on + strand, within BWI76_RS08095 at 1716.626 kb on - strand, within BWI76_RS08095 at 1716.638 kb on - strand, within BWI76_RS08095 at 1716.677 kb on + strand, within BWI76_RS08095 at 1716.685 kb on - strand, within BWI76_RS08095 at 1716.779 kb on + strand, within BWI76_RS08095 at 1716.780 kb on - strand, within BWI76_RS08095 at 1716.787 kb on - strand, within BWI76_RS08095 at 1716.787 kb on - strand, within BWI76_RS08095 at 1716.787 kb on - strand, within BWI76_RS08095 at 1716.839 kb on - strand, within BWI76_RS08095 at 1716.927 kb on - strand, within BWI76_RS08095 at 1716.976 kb on + strand, within BWI76_RS08095 at 1717.097 kb on - strand at 1717.246 kb on + strand, within BWI76_RS08100 at 1717.357 kb on + strand, within BWI76_RS08100 at 1717.357 kb on + strand, within BWI76_RS08100 at 1717.365 kb on - strand, within BWI76_RS08100 at 1717.365 kb on - strand, within BWI76_RS08100 at 1717.386 kb on - strand, within BWI76_RS08100 at 1717.699 kb on + strand at 1717.856 kb on + strand, within BWI76_RS08105 at 1717.883 kb on + strand, within BWI76_RS08105 at 1717.906 kb on - strand, within BWI76_RS08105 at 1718.024 kb on - strand, within BWI76_RS08105 at 1718.034 kb on - strand, within BWI76_RS08105
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,715,432 + BWI76_RS08090 0.67 +1.1 1,715,443 + BWI76_RS08090 0.67 -0.7 1,715,443 + BWI76_RS08090 0.67 +0.3 1,715,451 - +4.3 1,715,451 - BWI76_RS08090 0.68 -0.3 1,715,465 + BWI76_RS08090 0.69 -0.5 1,715,473 - BWI76_RS08090 0.69 -1.6 1,715,473 - BWI76_RS08090 0.69 -1.5 1,715,473 - BWI76_RS08090 0.69 +0.9 1,715,490 + BWI76_RS08090 0.70 -1.7 1,715,490 + BWI76_RS08090 0.70 -0.7 1,715,498 - BWI76_RS08090 0.71 +0.3 1,715,500 + BWI76_RS08090 0.71 +0.5 1,715,508 - BWI76_RS08090 0.71 -0.6 1,715,508 - BWI76_RS08090 0.71 +1.0 1,715,508 - BWI76_RS08090 0.71 +0.4 1,715,508 - BWI76_RS08090 0.71 +0.4 1,715,544 + BWI76_RS08090 0.73 -0.2 1,715,555 + BWI76_RS08090 0.74 -0.6 1,715,555 + BWI76_RS08090 0.74 +0.7 1,715,563 - BWI76_RS08090 0.74 +0.8 1,715,591 + BWI76_RS08090 0.76 -0.8 1,715,624 + BWI76_RS08090 0.78 +0.9 1,715,624 + BWI76_RS08090 0.78 -0.0 1,715,624 + BWI76_RS08090 0.78 -0.8 1,715,877 + -1.6 1,715,877 + +1.8 1,715,877 + +1.0 1,715,882 + +0.8 1,715,885 - -1.3 1,716,054 + -1.2 1,716,058 + -1.3 1,716,069 - -0.4 1,716,179 + +1.7 1,716,184 + -0.7 1,716,184 + -0.6 1,716,253 + +0.4 1,716,260 + +1.4 1,716,292 - -1.1 1,716,339 - +0.7 1,716,342 - +0.4 1,716,372 - -0.8 1,716,373 - -1.3 1,716,373 - -1.0 1,716,385 - -0.2 1,716,396 - -1.5 1,716,407 + +0.4 1,716,407 + -1.6 1,716,415 - -1.7 1,716,460 - BWI76_RS08095 0.13 -3.2 1,716,462 + BWI76_RS08095 0.13 -3.0 1,716,530 - BWI76_RS08095 0.22 -2.2 1,716,537 - BWI76_RS08095 0.23 -2.2 1,716,590 - BWI76_RS08095 0.31 -0.6 1,716,599 + BWI76_RS08095 0.32 -1.0 1,716,626 - BWI76_RS08095 0.36 -1.7 1,716,638 - BWI76_RS08095 0.37 -3.1 1,716,677 + BWI76_RS08095 0.43 -2.0 1,716,685 - BWI76_RS08095 0.44 -2.6 1,716,779 + BWI76_RS08095 0.57 -1.6 1,716,780 - BWI76_RS08095 0.57 -1.2 1,716,787 - BWI76_RS08095 0.58 -2.5 1,716,787 - BWI76_RS08095 0.58 -0.3 1,716,787 - BWI76_RS08095 0.58 -3.8 1,716,839 - BWI76_RS08095 0.65 -2.0 1,716,927 - BWI76_RS08095 0.77 -2.8 1,716,976 + BWI76_RS08095 0.84 -3.1 1,717,097 - -1.3 1,717,246 + BWI76_RS08100 0.23 -0.8 1,717,357 + BWI76_RS08100 0.39 -2.7 1,717,357 + BWI76_RS08100 0.39 -1.4 1,717,365 - BWI76_RS08100 0.40 -1.9 1,717,365 - BWI76_RS08100 0.40 -2.3 1,717,386 - BWI76_RS08100 0.44 -1.8 1,717,699 + -2.2 1,717,856 + BWI76_RS08105 0.12 -2.3 1,717,883 + BWI76_RS08105 0.16 -1.6 1,717,906 - BWI76_RS08105 0.19 -4.8 1,718,024 - BWI76_RS08105 0.35 -0.9 1,718,034 - BWI76_RS08105 0.36 +0.4
Or see this region's nucleotide sequence