Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06325 and BWI76_RS06330 are separated by 148 nucleotides BWI76_RS06330 and BWI76_RS06335 are separated by 45 nucleotides BWI76_RS06335 and BWI76_RS06340 are separated by 295 nucleotides BWI76_RS06340 and BWI76_RS06345 are separated by 147 nucleotides
BWI76_RS06325: BWI76_RS06325 - hypothetical protein, at 1,332,047 to 1,332,424
_RS06325
BWI76_RS06330: BWI76_RS06330 - DNA-binding transcriptional regulator, at 1,332,573 to 1,333,262
_RS06330
BWI76_RS06335: BWI76_RS06335 - nucleoside-specific channel-forming protein Tsx, at 1,333,308 to 1,334,192
_RS06335
BWI76_RS06340: BWI76_RS06340 - hypothetical protein, at 1,334,488 to 1,335,030
_RS06340
BWI76_RS06345: BWI76_RS06345 - transcriptional regulator NrdR, at 1,335,178 to 1,335,627
_RS06345
Position (kb)
1333
1334
1335 Strain fitness (log2 ratio)
-2
-1
0
1 at 1332.762 kb on + strand, within BWI76_RS06330 at 1332.953 kb on + strand, within BWI76_RS06330 at 1333.131 kb on - strand, within BWI76_RS06330 at 1333.395 kb on + strand at 1333.451 kb on - strand, within BWI76_RS06335 at 1333.461 kb on - strand, within BWI76_RS06335 at 1333.544 kb on + strand, within BWI76_RS06335 at 1333.544 kb on + strand, within BWI76_RS06335 at 1333.751 kb on - strand, within BWI76_RS06335 at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.205 kb on + strand at 1334.213 kb on - strand at 1334.217 kb on + strand at 1334.267 kb on - strand at 1334.457 kb on - strand at 1334.573 kb on - strand, within BWI76_RS06340
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,332,762 + BWI76_RS06330 0.27 -0.6 1,332,953 + BWI76_RS06330 0.55 -0.2 1,333,131 - BWI76_RS06330 0.81 -0.4 1,333,395 + +0.4 1,333,451 - BWI76_RS06335 0.16 -0.2 1,333,461 - BWI76_RS06335 0.17 -0.5 1,333,544 + BWI76_RS06335 0.27 -1.5 1,333,544 + BWI76_RS06335 0.27 -2.1 1,333,751 - BWI76_RS06335 0.50 -0.5 1,334,154 + -0.4 1,334,154 + +0.2 1,334,154 + -0.3 1,334,154 + +0.3 1,334,154 + -0.0 1,334,205 + -1.6 1,334,213 - -0.2 1,334,217 + -0.2 1,334,267 - +0.5 1,334,457 - -2.2 1,334,573 - BWI76_RS06340 0.16 +0.9
Or see this region's nucleotide sequence