Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05835 and BWI76_RS05840 are separated by 10 nucleotides BWI76_RS05840 and BWI76_RS05845 are separated by 290 nucleotides
BWI76_RS05835: BWI76_RS05835 - gamma-glutamyl-phosphate reductase, at 1,225,173 to 1,226,426
_RS05835
BWI76_RS05840: BWI76_RS05840 - glutamate 5-kinase, at 1,226,437 to 1,227,540
_RS05840
BWI76_RS05845: BWI76_RS05845 - phosphoporin PhoE, at 1,227,831 to 1,228,883
_RS05845
Position (kb)
1226
1227
1228 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1225.528 kb on - strand, within BWI76_RS05835 at 1226.142 kb on + strand, within BWI76_RS05835 at 1226.142 kb on + strand, within BWI76_RS05835 at 1226.310 kb on + strand at 1226.318 kb on + strand at 1226.364 kb on + strand at 1226.501 kb on - strand at 1226.919 kb on - strand, within BWI76_RS05840 at 1226.955 kb on + strand, within BWI76_RS05840 at 1226.980 kb on - strand, within BWI76_RS05840 at 1227.056 kb on - strand, within BWI76_RS05840 at 1227.180 kb on + strand, within BWI76_RS05840 at 1227.356 kb on - strand, within BWI76_RS05840 at 1227.387 kb on + strand, within BWI76_RS05840 at 1227.437 kb on - strand at 1227.469 kb on + strand at 1227.612 kb on + strand at 1227.612 kb on + strand at 1227.612 kb on + strand at 1227.630 kb on + strand at 1227.632 kb on + strand at 1227.638 kb on - strand at 1227.669 kb on + strand at 1227.767 kb on + strand at 1227.775 kb on - strand at 1227.775 kb on - strand at 1227.775 kb on - strand at 1227.787 kb on - strand at 1227.790 kb on + strand at 1227.798 kb on - strand at 1227.798 kb on - strand at 1227.798 kb on - strand at 1227.821 kb on + strand at 1227.821 kb on + strand at 1227.829 kb on - strand at 1227.853 kb on + strand at 1227.865 kb on + strand at 1227.938 kb on - strand, within BWI76_RS05845 at 1227.941 kb on + strand, within BWI76_RS05845 at 1227.949 kb on - strand, within BWI76_RS05845 at 1227.949 kb on - strand, within BWI76_RS05845 at 1227.949 kb on - strand, within BWI76_RS05845 at 1227.954 kb on + strand, within BWI76_RS05845 at 1227.956 kb on + strand, within BWI76_RS05845 at 1227.964 kb on - strand, within BWI76_RS05845 at 1227.964 kb on - strand, within BWI76_RS05845 at 1227.987 kb on + strand, within BWI76_RS05845 at 1227.995 kb on - strand, within BWI76_RS05845 at 1228.000 kb on - strand, within BWI76_RS05845 at 1228.127 kb on - strand, within BWI76_RS05845 at 1228.199 kb on - strand, within BWI76_RS05845 at 1228.253 kb on - strand, within BWI76_RS05845 at 1228.321 kb on + strand, within BWI76_RS05845 at 1228.409 kb on - strand, within BWI76_RS05845 at 1228.446 kb on + strand, within BWI76_RS05845 at 1228.446 kb on + strand, within BWI76_RS05845 at 1228.446 kb on + strand, within BWI76_RS05845 at 1228.446 kb on + strand, within BWI76_RS05845 at 1228.454 kb on - strand, within BWI76_RS05845 at 1228.528 kb on + strand, within BWI76_RS05845
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 1,225,528 - BWI76_RS05835 0.28 -4.2 1,226,142 + BWI76_RS05835 0.77 -3.6 1,226,142 + BWI76_RS05835 0.77 -2.2 1,226,310 + -4.2 1,226,318 + -4.0 1,226,364 + -0.7 1,226,501 - -2.2 1,226,919 - BWI76_RS05840 0.44 -4.6 1,226,955 + BWI76_RS05840 0.47 -3.8 1,226,980 - BWI76_RS05840 0.49 -4.0 1,227,056 - BWI76_RS05840 0.56 -1.1 1,227,180 + BWI76_RS05840 0.67 -3.0 1,227,356 - BWI76_RS05840 0.83 -2.7 1,227,387 + BWI76_RS05840 0.86 -2.4 1,227,437 - -4.0 1,227,469 + -4.5 1,227,612 + -0.1 1,227,612 + -0.4 1,227,612 + +1.4 1,227,630 + +0.2 1,227,632 + -1.5 1,227,638 - -0.0 1,227,669 + -0.5 1,227,767 + +0.2 1,227,775 - +0.2 1,227,775 - +0.3 1,227,775 - +0.0 1,227,787 - +1.9 1,227,790 + +0.0 1,227,798 - -0.8 1,227,798 - +1.1 1,227,798 - -0.2 1,227,821 + +0.4 1,227,821 + +1.0 1,227,829 - -0.3 1,227,853 + +0.2 1,227,865 + -1.1 1,227,938 - BWI76_RS05845 0.10 -0.5 1,227,941 + BWI76_RS05845 0.10 -0.3 1,227,949 - BWI76_RS05845 0.11 -0.7 1,227,949 - BWI76_RS05845 0.11 +2.3 1,227,949 - BWI76_RS05845 0.11 +0.8 1,227,954 + BWI76_RS05845 0.12 +0.3 1,227,956 + BWI76_RS05845 0.12 +0.3 1,227,964 - BWI76_RS05845 0.13 -0.7 1,227,964 - BWI76_RS05845 0.13 +0.5 1,227,987 + BWI76_RS05845 0.15 -0.7 1,227,995 - BWI76_RS05845 0.16 +1.1 1,228,000 - BWI76_RS05845 0.16 -1.1 1,228,127 - BWI76_RS05845 0.28 -0.7 1,228,199 - BWI76_RS05845 0.35 +0.3 1,228,253 - BWI76_RS05845 0.40 +0.2 1,228,321 + BWI76_RS05845 0.47 +0.2 1,228,409 - BWI76_RS05845 0.55 -1.8 1,228,446 + BWI76_RS05845 0.58 -0.1 1,228,446 + BWI76_RS05845 0.58 +0.1 1,228,446 + BWI76_RS05845 0.58 +1.1 1,228,446 + BWI76_RS05845 0.58 +0.1 1,228,454 - BWI76_RS05845 0.59 -1.1 1,228,528 + BWI76_RS05845 0.66 -1.0
Or see this region's nucleotide sequence