Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03545 and BWI76_RS03550 are separated by 17 nucleotides BWI76_RS03550 and BWI76_RS03555 are separated by 3 nucleotides BWI76_RS03555 and BWI76_RS03560 are separated by 12 nucleotides BWI76_RS03560 and BWI76_RS03565 overlap by 4 nucleotides
BWI76_RS03545: BWI76_RS03545 - QacE family quaternary ammonium compound efflux SMR transporter, at 735,914 to 736,243
_RS03545
BWI76_RS03550: BWI76_RS03550 - QacE family quaternary ammonium compound efflux SMR transporter, at 736,261 to 736,680
_RS03550
BWI76_RS03555: BWI76_RS03555 - hypothetical protein, at 736,684 to 737,385
_RS03555
BWI76_RS03560: BWI76_RS03560 - propanediol utilization phosphotransacylase, at 737,398 to 738,018
_RS03560
BWI76_RS03565: BWI76_RS03565 - BMC domain-containing protein, at 738,015 to 738,443
_RS03565
Position (kb) 736
737
738 Strain fitness (log2 ratio) -2
-1
0
1
2 at 735.688 kb on + strand at 735.697 kb on - strand at 735.770 kb on + strand at 735.803 kb on + strand at 735.806 kb on + strand at 735.827 kb on - strand at 735.880 kb on + strand at 735.912 kb on + strand at 735.912 kb on + strand at 735.913 kb on + strand at 735.914 kb on - strand at 735.920 kb on - strand at 735.964 kb on - strand, within BWI76_RS03545 at 735.964 kb on - strand, within BWI76_RS03545 at 735.974 kb on - strand, within BWI76_RS03545 at 736.036 kb on + strand, within BWI76_RS03545 at 736.038 kb on + strand, within BWI76_RS03545 at 736.075 kb on + strand, within BWI76_RS03545 at 736.075 kb on + strand, within BWI76_RS03545 at 736.094 kb on + strand, within BWI76_RS03545 at 736.102 kb on - strand, within BWI76_RS03545 at 736.104 kb on + strand, within BWI76_RS03545 at 736.112 kb on - strand, within BWI76_RS03545 at 736.149 kb on + strand, within BWI76_RS03545 at 736.457 kb on - strand, within BWI76_RS03550 at 736.478 kb on + strand, within BWI76_RS03550 at 736.478 kb on + strand, within BWI76_RS03550 at 736.478 kb on + strand, within BWI76_RS03550 at 736.491 kb on - strand, within BWI76_RS03550 at 736.491 kb on - strand, within BWI76_RS03550 at 736.509 kb on - strand, within BWI76_RS03550 at 736.548 kb on - strand, within BWI76_RS03550 at 736.608 kb on + strand, within BWI76_RS03550 at 736.769 kb on + strand, within BWI76_RS03555 at 736.822 kb on - strand, within BWI76_RS03555 at 736.958 kb on + strand, within BWI76_RS03555 at 736.958 kb on + strand, within BWI76_RS03555 at 737.080 kb on - strand, within BWI76_RS03555 at 737.148 kb on + strand, within BWI76_RS03555 at 737.150 kb on + strand, within BWI76_RS03555 at 737.150 kb on + strand, within BWI76_RS03555 at 737.244 kb on + strand, within BWI76_RS03555 at 737.325 kb on - strand at 737.408 kb on + strand at 737.746 kb on - strand, within BWI76_RS03560 at 737.830 kb on + strand, within BWI76_RS03560 at 737.830 kb on + strand, within BWI76_RS03560 at 737.838 kb on - strand, within BWI76_RS03560 at 737.838 kb on - strand, within BWI76_RS03560 at 737.890 kb on - strand, within BWI76_RS03560 at 738.014 kb on - strand at 738.029 kb on - strand at 738.092 kb on + strand, within BWI76_RS03565 at 738.179 kb on - strand, within BWI76_RS03565 at 738.179 kb on - strand, within BWI76_RS03565 at 738.209 kb on + strand, within BWI76_RS03565 at 738.229 kb on + strand, within BWI76_RS03565 at 738.292 kb on + strand, within BWI76_RS03565 at 738.357 kb on + strand, within BWI76_RS03565
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 735,688 + +0.2 735,697 - -2.4 735,770 + -1.2 735,803 + +1.2 735,806 + +0.3 735,827 - +1.4 735,880 + -0.5 735,912 + +0.5 735,912 + -0.2 735,913 + -0.8 735,914 - -0.1 735,920 - +1.0 735,964 - BWI76_RS03545 0.15 +0.3 735,964 - BWI76_RS03545 0.15 +0.1 735,974 - BWI76_RS03545 0.18 +0.5 736,036 + BWI76_RS03545 0.37 +0.6 736,038 + BWI76_RS03545 0.38 +0.4 736,075 + BWI76_RS03545 0.49 -0.5 736,075 + BWI76_RS03545 0.49 +0.6 736,094 + BWI76_RS03545 0.55 +1.7 736,102 - BWI76_RS03545 0.57 +2.0 736,104 + BWI76_RS03545 0.58 +0.0 736,112 - BWI76_RS03545 0.60 +0.1 736,149 + BWI76_RS03545 0.71 -0.2 736,457 - BWI76_RS03550 0.47 -0.4 736,478 + BWI76_RS03550 0.52 +0.0 736,478 + BWI76_RS03550 0.52 -0.2 736,478 + BWI76_RS03550 0.52 -0.0 736,491 - BWI76_RS03550 0.55 -0.6 736,491 - BWI76_RS03550 0.55 -0.2 736,509 - BWI76_RS03550 0.59 -0.6 736,548 - BWI76_RS03550 0.68 +0.2 736,608 + BWI76_RS03550 0.83 +0.4 736,769 + BWI76_RS03555 0.12 +0.4 736,822 - BWI76_RS03555 0.20 -0.7 736,958 + BWI76_RS03555 0.39 +1.1 736,958 + BWI76_RS03555 0.39 +0.2 737,080 - BWI76_RS03555 0.56 +0.4 737,148 + BWI76_RS03555 0.66 +0.8 737,150 + BWI76_RS03555 0.66 -0.1 737,150 + BWI76_RS03555 0.66 +0.5 737,244 + BWI76_RS03555 0.80 +1.0 737,325 - -1.1 737,408 + -0.7 737,746 - BWI76_RS03560 0.56 -0.2 737,830 + BWI76_RS03560 0.70 +0.0 737,830 + BWI76_RS03560 0.70 +1.1 737,838 - BWI76_RS03560 0.71 -0.7 737,838 - BWI76_RS03560 0.71 +0.4 737,890 - BWI76_RS03560 0.79 -0.7 738,014 - -1.0 738,029 - -1.8 738,092 + BWI76_RS03565 0.18 +0.2 738,179 - BWI76_RS03565 0.38 -0.8 738,179 - BWI76_RS03565 0.38 -0.2 738,209 + BWI76_RS03565 0.45 +0.1 738,229 + BWI76_RS03565 0.50 -0.2 738,292 + BWI76_RS03565 0.65 +2.0 738,357 + BWI76_RS03565 0.80 +0.2
Or see this region's nucleotide sequence