Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01640 and BWI76_RS01645 are separated by 54 nucleotides BWI76_RS01645 and BWI76_RS01650 are separated by 99 nucleotides BWI76_RS01650 and BWI76_RS01655 are separated by 156 nucleotides BWI76_RS01655 and BWI76_RS01660 are separated by 259 nucleotides
BWI76_RS01640: BWI76_RS01640 - 23S ribosomal RNA, at 331,939 to 334,865
_RS01640
BWI76_RS01645: BWI76_RS01645 - 5S ribosomal RNA, at 334,920 to 335,035
_RS01645
BWI76_RS01650: BWI76_RS01650 - acetyltransferase, at 335,135 to 335,572
_RS01650
BWI76_RS01655: BWI76_RS01655 - homoserine O-succinyltransferase, at 335,729 to 336,658
_RS01655
BWI76_RS01660: BWI76_RS01660 - malate synthase A, at 336,918 to 338,519
_RS01660
Position (kb) 335
336
337 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 335.186 kb on - strand, within BWI76_RS01650 at 335.203 kb on + strand, within BWI76_RS01650 at 335.395 kb on - strand, within BWI76_RS01650 at 335.632 kb on + strand at 335.640 kb on - strand at 335.705 kb on - strand at 335.918 kb on - strand, within BWI76_RS01655 at 336.033 kb on + strand, within BWI76_RS01655 at 336.115 kb on - strand, within BWI76_RS01655 at 336.115 kb on - strand, within BWI76_RS01655 at 336.135 kb on + strand, within BWI76_RS01655 at 336.143 kb on - strand, within BWI76_RS01655 at 336.447 kb on + strand, within BWI76_RS01655 at 336.447 kb on + strand, within BWI76_RS01655 at 336.455 kb on - strand, within BWI76_RS01655 at 336.621 kb on - strand at 336.660 kb on + strand at 336.771 kb on + strand at 336.909 kb on - strand at 336.970 kb on - strand at 337.020 kb on + strand at 337.284 kb on - strand, within BWI76_RS01660 at 337.316 kb on + strand, within BWI76_RS01660 at 337.333 kb on - strand, within BWI76_RS01660 at 337.362 kb on - strand, within BWI76_RS01660 at 337.365 kb on - strand, within BWI76_RS01660 at 337.629 kb on - strand, within BWI76_RS01660 at 337.650 kb on - strand, within BWI76_RS01660
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 335,186 - BWI76_RS01650 0.12 +0.3 335,203 + BWI76_RS01650 0.16 +0.1 335,395 - BWI76_RS01650 0.59 +1.0 335,632 + +0.1 335,640 - -1.1 335,705 - -3.1 335,918 - BWI76_RS01655 0.20 -5.6 336,033 + BWI76_RS01655 0.33 -1.2 336,115 - BWI76_RS01655 0.42 -5.1 336,115 - BWI76_RS01655 0.42 -4.7 336,135 + BWI76_RS01655 0.44 -4.4 336,143 - BWI76_RS01655 0.45 -1.6 336,447 + BWI76_RS01655 0.77 -4.9 336,447 + BWI76_RS01655 0.77 -2.2 336,455 - BWI76_RS01655 0.78 -4.6 336,621 - -0.4 336,660 + +0.9 336,771 + -0.7 336,909 - +0.2 336,970 - -0.0 337,020 + -0.1 337,284 - BWI76_RS01660 0.23 -1.1 337,316 + BWI76_RS01660 0.25 -0.7 337,333 - BWI76_RS01660 0.26 -0.5 337,362 - BWI76_RS01660 0.28 -0.6 337,365 - BWI76_RS01660 0.28 +0.9 337,629 - BWI76_RS01660 0.44 -0.4 337,650 - BWI76_RS01660 0.46 -0.0
Or see this region's nucleotide sequence