Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00985 and BWI76_RS00990 are separated by 163 nucleotides BWI76_RS00990 and BWI76_RS00995 are separated by 100 nucleotides BWI76_RS00995 and BWI76_RS01000 are separated by 52 nucleotides BWI76_RS01000 and BWI76_RS01005 are separated by 194 nucleotides
BWI76_RS00985: BWI76_RS00985 - transcriptional regulator IlvY, at 201,750 to 202,640
_RS00985
BWI76_RS00990: BWI76_RS00990 - ketol-acid reductoisomerase, at 202,804 to 204,279
_RS00990
BWI76_RS00995: BWI76_RS00995 - peptidyl-prolyl cis-trans isomerase, at 204,380 to 204,661
_RS00995
BWI76_RS01000: BWI76_RS01000 - peptidyl-prolyl cis-trans isomerase, at 204,714 to 204,995
_RS01000
BWI76_RS01005: BWI76_RS01005 - CarD family transcriptional regulator, at 205,190 to 205,894
_RS01005
Position (kb) 202
203
204
205 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 201.918 kb on - strand, within BWI76_RS00985 at 201.928 kb on - strand, within BWI76_RS00985 at 201.974 kb on + strand, within BWI76_RS00985 at 202.030 kb on - strand, within BWI76_RS00985 at 202.043 kb on - strand, within BWI76_RS00985 at 202.101 kb on - strand, within BWI76_RS00985 at 202.114 kb on + strand, within BWI76_RS00985 at 202.114 kb on + strand, within BWI76_RS00985 at 202.177 kb on + strand, within BWI76_RS00985 at 202.264 kb on + strand, within BWI76_RS00985 at 202.444 kb on + strand, within BWI76_RS00985 at 202.515 kb on + strand, within BWI76_RS00985 at 202.560 kb on + strand at 202.610 kb on + strand at 202.625 kb on - strand at 202.796 kb on + strand at 202.862 kb on - strand at 202.960 kb on + strand, within BWI76_RS00990 at 202.968 kb on - strand, within BWI76_RS00990 at 202.971 kb on + strand, within BWI76_RS00990 at 202.976 kb on + strand, within BWI76_RS00990 at 203.048 kb on - strand, within BWI76_RS00990 at 203.182 kb on + strand, within BWI76_RS00990 at 203.379 kb on + strand, within BWI76_RS00990 at 203.617 kb on - strand, within BWI76_RS00990 at 203.617 kb on - strand, within BWI76_RS00990 at 203.709 kb on + strand, within BWI76_RS00990 at 204.075 kb on - strand at 204.167 kb on + strand at 204.305 kb on + strand at 204.306 kb on + strand at 204.330 kb on + strand at 204.458 kb on + strand, within BWI76_RS00995 at 204.466 kb on - strand, within BWI76_RS00995 at 204.496 kb on - strand, within BWI76_RS00995 at 204.720 kb on - strand at 204.783 kb on - strand, within BWI76_RS01000 at 204.800 kb on - strand at 204.819 kb on + strand, within BWI76_RS01000 at 204.906 kb on + strand, within BWI76_RS01000 at 204.936 kb on - strand, within BWI76_RS01000 at 204.948 kb on + strand, within BWI76_RS01000 at 204.977 kb on - strand at 204.977 kb on - strand at 205.053 kb on + strand at 205.053 kb on + strand at 205.145 kb on + strand at 205.163 kb on + strand at 205.163 kb on + strand at 205.165 kb on + strand at 205.165 kb on + strand at 205.166 kb on - strand at 205.240 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 201,918 - BWI76_RS00985 0.19 -1.8 201,928 - BWI76_RS00985 0.20 -2.4 201,974 + BWI76_RS00985 0.25 -0.6 202,030 - BWI76_RS00985 0.31 -2.1 202,043 - BWI76_RS00985 0.33 -1.8 202,101 - BWI76_RS00985 0.39 -2.7 202,114 + BWI76_RS00985 0.41 -1.0 202,114 + BWI76_RS00985 0.41 -0.3 202,177 + BWI76_RS00985 0.48 -1.2 202,264 + BWI76_RS00985 0.58 -0.9 202,444 + BWI76_RS00985 0.78 -0.3 202,515 + BWI76_RS00985 0.86 -2.6 202,560 + -2.4 202,610 + -0.0 202,625 - -1.3 202,796 + -2.3 202,862 - -4.5 202,960 + BWI76_RS00990 0.11 -0.7 202,968 - BWI76_RS00990 0.11 -3.4 202,971 + BWI76_RS00990 0.11 -5.1 202,976 + BWI76_RS00990 0.12 -4.1 203,048 - BWI76_RS00990 0.17 -2.3 203,182 + BWI76_RS00990 0.26 -6.8 203,379 + BWI76_RS00990 0.39 -3.9 203,617 - BWI76_RS00990 0.55 -1.0 203,617 - BWI76_RS00990 0.55 -4.1 203,709 + BWI76_RS00990 0.61 -1.2 204,075 - -0.9 204,167 + -3.2 204,305 + +0.1 204,306 + +0.2 204,330 + +1.0 204,458 + BWI76_RS00995 0.28 +0.1 204,466 - BWI76_RS00995 0.30 +0.7 204,496 - BWI76_RS00995 0.41 +0.5 204,720 - +0.7 204,783 - BWI76_RS01000 0.24 +0.4 204,800 - +0.7 204,819 + BWI76_RS01000 0.37 -1.2 204,906 + BWI76_RS01000 0.68 +1.3 204,936 - BWI76_RS01000 0.79 +0.5 204,948 + BWI76_RS01000 0.83 -0.1 204,977 - -1.2 204,977 - +0.7 205,053 + -0.6 205,053 + +1.2 205,145 + +1.6 205,163 + -0.9 205,163 + -0.4 205,165 + -0.7 205,165 + +1.0 205,166 - -0.3 205,240 + -0.7
Or see this region's nucleotide sequence