Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3147 and DvMF_3148 are separated by 148 nucleotides DvMF_3148 and DvMF_3149 are separated by 92 nucleotides DvMF_3149 and DvMF_3150 are separated by 263 nucleotides
DvMF_3147: DvMF_3147 - alpha-glucan phosphorylase (RefSeq), at 3,970,413 to 3,972,983
_3147
DvMF_3148: DvMF_3148 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (RefSeq), at 3,973,132 to 3,973,641
_3148
DvMF_3149: DvMF_3149 - acetylornithine aminotransferase (RefSeq), at 3,973,734 to 3,974,942
_3149
DvMF_3150: DvMF_3150 - hypothetical protein (RefSeq), at 3,975,206 to 3,975,556
_3150
Position (kb)
3973
3974
3975 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 3972.782 kb on + strand at 3972.782 kb on + strand at 3972.937 kb on + strand at 3973.408 kb on - strand, within DvMF_3148 at 3974.009 kb on + strand, within DvMF_3149 at 3974.026 kb on + strand, within DvMF_3149 at 3974.060 kb on + strand, within DvMF_3149 at 3974.098 kb on - strand, within DvMF_3149 at 3974.171 kb on - strand, within DvMF_3149 at 3974.200 kb on - strand, within DvMF_3149 at 3974.200 kb on - strand, within DvMF_3149 at 3974.205 kb on - strand, within DvMF_3149 at 3974.396 kb on + strand, within DvMF_3149 at 3974.396 kb on + strand, within DvMF_3149 at 3974.429 kb on - strand, within DvMF_3149 at 3974.449 kb on - strand, within DvMF_3149 at 3974.613 kb on + strand, within DvMF_3149 at 3974.751 kb on - strand, within DvMF_3149 at 3974.774 kb on - strand, within DvMF_3149 at 3975.111 kb on + strand at 3975.278 kb on + strand, within DvMF_3150
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,972,782 + +0.3 3,972,782 + -1.0 3,972,937 + +0.5 3,973,408 - DvMF_3148 0.54 -0.7 3,974,009 + DvMF_3149 0.23 -5.0 3,974,026 + DvMF_3149 0.24 -3.5 3,974,060 + DvMF_3149 0.27 -7.2 3,974,098 - DvMF_3149 0.30 -5.2 3,974,171 - DvMF_3149 0.36 -2.7 3,974,200 - DvMF_3149 0.39 -4.1 3,974,200 - DvMF_3149 0.39 -5.1 3,974,205 - DvMF_3149 0.39 -5.1 3,974,396 + DvMF_3149 0.55 -7.4 3,974,396 + DvMF_3149 0.55 -6.2 3,974,429 - DvMF_3149 0.57 -4.9 3,974,449 - DvMF_3149 0.59 -3.4 3,974,613 + DvMF_3149 0.73 -5.2 3,974,751 - DvMF_3149 0.84 -7.4 3,974,774 - DvMF_3149 0.86 -4.8 3,975,111 + +0.6 3,975,278 + DvMF_3150 0.21 -0.5
Or see this region's nucleotide sequence