Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2986 and DvMF_2987 are separated by 207 nucleotides DvMF_2987 and DvMF_2988 are separated by 360 nucleotides DvMF_2988 and DvMF_R0076 are separated by 313 nucleotides DvMF_R0076 and DvMF_2989 are separated by 101 nucleotides
DvMF_2986: DvMF_2986 - multi-sensor hybrid histidine kinase (RefSeq), at 3,762,159 to 3,765,845
_2986
DvMF_2987: DvMF_2987 - EF hand domain-containing protein (RefSeq), at 3,766,053 to 3,766,406
_2987
DvMF_2988: DvMF_2988 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 3,766,767 to 3,768,821
_2988
DvMF_R0076: DvMF_R0076 - tRNA-Asn (RefSeq), at 3,769,135 to 3,769,210
_R0076
DvMF_2989: DvMF_2989 - Na+/H+ antiporter NhaA (RefSeq), at 3,769,312 to 3,770,694
_2989
Position (kb)
3766
3767
3768
3769 Strain fitness (log2 ratio)
-2
-1
0
1 at 3765.885 kb on - strand at 3766.055 kb on + strand at 3766.063 kb on - strand at 3766.087 kb on - strand at 3766.104 kb on - strand, within DvMF_2987 at 3766.374 kb on - strand at 3766.508 kb on + strand at 3766.516 kb on - strand at 3766.545 kb on - strand at 3766.555 kb on - strand at 3766.685 kb on + strand at 3766.782 kb on - strand at 3766.782 kb on - strand at 3766.938 kb on + strand at 3766.970 kb on + strand at 3767.055 kb on + strand, within DvMF_2988 at 3767.258 kb on + strand, within DvMF_2988 at 3767.307 kb on - strand, within DvMF_2988 at 3767.345 kb on + strand, within DvMF_2988 at 3767.410 kb on + strand, within DvMF_2988 at 3767.680 kb on - strand, within DvMF_2988 at 3767.923 kb on + strand, within DvMF_2988 at 3767.923 kb on + strand, within DvMF_2988 at 3767.976 kb on - strand, within DvMF_2988 at 3767.981 kb on - strand, within DvMF_2988 at 3768.059 kb on - strand, within DvMF_2988 at 3768.059 kb on - strand, within DvMF_2988 at 3768.279 kb on - strand, within DvMF_2988 at 3768.414 kb on - strand, within DvMF_2988 at 3768.475 kb on - strand, within DvMF_2988 at 3768.495 kb on - strand, within DvMF_2988 at 3768.559 kb on + strand, within DvMF_2988 at 3768.631 kb on + strand at 3768.739 kb on + strand at 3768.789 kb on + strand at 3768.918 kb on + strand at 3768.926 kb on - strand at 3769.049 kb on - strand at 3769.340 kb on + strand at 3769.348 kb on - strand at 3769.413 kb on + strand at 3769.422 kb on + strand at 3769.423 kb on + strand at 3769.437 kb on + strand at 3769.450 kb on - strand at 3769.656 kb on + strand, within DvMF_2989
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 3,765,885 - -1.3 3,766,055 + -0.9 3,766,063 - -0.6 3,766,087 - -0.4 3,766,104 - DvMF_2987 0.14 +0.2 3,766,374 - -0.3 3,766,508 + -0.5 3,766,516 - -0.6 3,766,545 - -0.2 3,766,555 - -1.4 3,766,685 + -0.4 3,766,782 - -0.1 3,766,782 - +0.1 3,766,938 + -0.3 3,766,970 + -1.2 3,767,055 + DvMF_2988 0.14 -1.1 3,767,258 + DvMF_2988 0.24 -0.4 3,767,307 - DvMF_2988 0.26 -0.8 3,767,345 + DvMF_2988 0.28 -1.1 3,767,410 + DvMF_2988 0.31 -0.3 3,767,680 - DvMF_2988 0.44 +0.3 3,767,923 + DvMF_2988 0.56 -0.2 3,767,923 + DvMF_2988 0.56 -0.4 3,767,976 - DvMF_2988 0.59 -0.6 3,767,981 - DvMF_2988 0.59 -0.1 3,768,059 - DvMF_2988 0.63 -0.8 3,768,059 - DvMF_2988 0.63 -1.1 3,768,279 - DvMF_2988 0.74 -1.8 3,768,414 - DvMF_2988 0.80 -1.3 3,768,475 - DvMF_2988 0.83 +0.7 3,768,495 - DvMF_2988 0.84 -0.1 3,768,559 + DvMF_2988 0.87 -0.9 3,768,631 + -0.5 3,768,739 + -0.7 3,768,789 + -1.2 3,768,918 + -0.3 3,768,926 - -1.3 3,769,049 - -0.1 3,769,340 + -0.1 3,769,348 - -0.1 3,769,413 + +0.3 3,769,422 + -0.5 3,769,423 + -2.5 3,769,437 + -0.8 3,769,450 - -0.9 3,769,656 + DvMF_2989 0.25 -0.5
Or see this region's nucleotide sequence