Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1933 and DvMF_1934 are separated by 153 nucleotides DvMF_1934 and DvMF_1935 are separated by 413 nucleotides
DvMF_1933: DvMF_1933 - PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 2,384,612 to 2,386,036
_1933
DvMF_1934: DvMF_1934 - sulfoacetaldehyde acetyltransferase (RefSeq), at 2,386,190 to 2,387,932
_1934
DvMF_1935: DvMF_1935 - hypothetical protein (RefSeq), at 2,388,346 to 2,388,756
_1935
Position (kb)
2386
2387
2388 Strain fitness (log2 ratio)
-2
-1
0
1 at 2385.597 kb on + strand, within DvMF_1933 at 2385.662 kb on + strand, within DvMF_1933 at 2385.670 kb on - strand, within DvMF_1933 at 2385.809 kb on + strand, within DvMF_1933 at 2385.927 kb on - strand at 2385.981 kb on - strand at 2386.043 kb on - strand at 2386.078 kb on + strand at 2386.312 kb on - strand at 2386.798 kb on - strand, within DvMF_1934 at 2386.798 kb on - strand, within DvMF_1934 at 2387.049 kb on - strand, within DvMF_1934 at 2387.142 kb on - strand, within DvMF_1934 at 2387.583 kb on - strand, within DvMF_1934 at 2387.593 kb on + strand, within DvMF_1934 at 2387.601 kb on - strand, within DvMF_1934 at 2387.711 kb on + strand, within DvMF_1934 at 2388.140 kb on + strand at 2388.318 kb on + strand at 2388.505 kb on + strand, within DvMF_1935 at 2388.550 kb on + strand, within DvMF_1935 at 2388.628 kb on + strand, within DvMF_1935 at 2388.714 kb on + strand, within DvMF_1935 at 2388.746 kb on - strand at 2388.759 kb on - strand at 2388.759 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,385,597 + DvMF_1933 0.69 -0.3 2,385,662 + DvMF_1933 0.74 -0.6 2,385,670 - DvMF_1933 0.74 +0.1 2,385,809 + DvMF_1933 0.84 -0.7 2,385,927 - -0.4 2,385,981 - -0.4 2,386,043 - -0.2 2,386,078 + -0.5 2,386,312 - -0.7 2,386,798 - DvMF_1934 0.35 -0.5 2,386,798 - DvMF_1934 0.35 -0.8 2,387,049 - DvMF_1934 0.49 -0.5 2,387,142 - DvMF_1934 0.55 -0.2 2,387,583 - DvMF_1934 0.80 +0.1 2,387,593 + DvMF_1934 0.80 +0.9 2,387,601 - DvMF_1934 0.81 +0.5 2,387,711 + DvMF_1934 0.87 +0.8 2,388,140 + -2.1 2,388,318 + -0.2 2,388,505 + DvMF_1935 0.39 +0.2 2,388,550 + DvMF_1935 0.50 -0.7 2,388,628 + DvMF_1935 0.69 -1.8 2,388,714 + DvMF_1935 0.90 -0.6 2,388,746 - -0.6 2,388,759 - +0.6 2,388,759 - -0.7
Or see this region's nucleotide sequence